RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PLXNA1Q9UIW2 1896 aa37.13■■■■□ 3.54
LDB1-204ENST00000490751 CEP290O15078 2479 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 PDE4AP27815 886 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 CNGA1P29973 690 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 HAND2P61296 217 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 SNRNP48Q6IEG0 339 aaKnown RBP37.13■■■■□ 3.53
LDB1-204ENST00000490751 CWC27Q6UX04 472 aaKnown RBP37.13■■■■□ 3.53
LDB1-204ENST00000490751 TRPV1Q8NER1 839 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 ISY1Q9ULR0 285 aaKnown RBP37.13■■■■□ 3.53
LDB1-204ENST00000490751 CTDP1Q9Y5B0 961 aaPredicted RBP37.13■■■■□ 3.53
LDB1-204ENST00000490751 NR2E3Q9Y5X4 410 aa37.13■■■■□ 3.53
LDB1-204ENST00000490751 ZBED4O75132 1171 aa37.12■■■■□ 3.53
LDB1-204ENST00000490751 CYBAP13498 195 aa37.12■■■■□ 3.53
LDB1-204ENST00000490751 KCTD2Q14681 263 aa37.12■■■■□ 3.53
LDB1-204ENST00000490751 RRP12Q5JTH9 1297 aaKnown RBP37.12■■■■□ 3.53
LDB1-204ENST00000490751 MAML3Q96JK9 1138 aa37.12■■■■□ 3.53
LDB1-204ENST00000490751 C11orf49Q9H6J7 331 aa37.12■■■■□ 3.53
LDB1-204ENST00000490751 HIP1O00291 1037 aa37.11■■■■□ 3.53
LDB1-204ENST00000490751 CPXCR1Q8N123 301 aa37.11■■■■□ 3.53
LDB1-204ENST00000490751 CHMP4CQ96CF2 233 aa37.11■■■■□ 3.53
LDB1-204ENST00000490751 GMCL1Q96IK5 515 aa37.11■■■■□ 3.53
LDB1-204ENST00000490751 DDX20Q9UHI6 824 aaKnown RBP37.11■■■■□ 3.53
LDB1-204ENST00000490751 EVI5O60447 810 aa37.1■■■■□ 3.53
LDB1-204ENST00000490751 PGK2P07205 417 aa37.1■■■■□ 3.53
LDB1-204ENST00000490751 SLC38A10Q9HBR0 1119 aa37.1■■■■□ 3.53
LDB1-204ENST00000490751 RIPK3Q9Y572 518 aa37.1■■■■□ 3.53
LDB1-204ENST00000490751 TMEM232C9JQI7 657 aa37.09■■■■□ 3.53
LDB1-204ENST00000490751 ATP2A1O14983 1001 aa37.09■■■■□ 3.53
LDB1-204ENST00000490751 MSCO60682 206 aa37.09■■■■□ 3.53
LDB1-204ENST00000490751 SLC1A4P43007 532 aa37.09■■■■□ 3.53
LDB1-204ENST00000490751 RAVER2Q9HCJ3 691 aaKnown RBP37.09■■■■□ 3.53
LDB1-204ENST00000490751 LAMA4Q16363 1823 aa37.08■■■■□ 3.53
LDB1-204ENST00000490751 MCCP23508 829 aa37.08■■■■□ 3.53
LDB1-204ENST00000490751 SLC4A3P48751 1232 aa37.08■■■■□ 3.53
LDB1-204ENST00000490751 NOVP48745 357 aa37.07■■■■□ 3.52
LDB1-204ENST00000490751 STAT2P52630 851 aa37.07■■■■□ 3.52
LDB1-204ENST00000490751 HABP4Q5JVS0 413 aaKnown RBP37.07■■■■□ 3.52
LDB1-204ENST00000490751 SLC34A2O95436 690 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 IKQ13123 557 aaPredicted RBP37.06■■■■□ 3.52
LDB1-204ENST00000490751 ZNF792Q3KQV3 632 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 AKNAD1Q5T1N1 836 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 FAM160B2Q86V87 743 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 TBC1D10CQ8IV04 446 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 COLQQ9Y215 455 aaPredicted RBP37.06■■■■□ 3.52
LDB1-204ENST00000490751 PFASO15067 1338 aa37.06■■■■□ 3.52
LDB1-204ENST00000490751 MFSD6Q6ZSS7 791 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 KCTD1Q719H9 257 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 RASGRP2Q7LDG7 609 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 CHURC1Q8WUH1 139 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 STAG1Q8WVM7 1258 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 MTMR7Q9Y216 660 aa37.05■■■■□ 3.52
LDB1-204ENST00000490751 DIS3Q9Y2L1 958 aaKnown RBP37.05■■■■□ 3.52
LDB1-204ENST00000490751 GSPT1P15170 499 aaKnown RBP37.04■■■■□ 3.52
LDB1-204ENST00000490751 OAZ1P54368 228 aa37.04■■■■□ 3.52
LDB1-204ENST00000490751 PRAMEF19Q5SWL8 479 aa37.04■■■■□ 3.52
LDB1-204ENST00000490751 TTC22Q5TAA0 569 aa37.04■■■■□ 3.52
LDB1-204ENST00000490751 FDX1P10109 184 aa37.03■■■■□ 3.52
LDB1-204ENST00000490751 PCP11498 1178 aaKnown RBP37.03■■■■□ 3.52
LDB1-204ENST00000490751 COL6A1P12109 1028 aa37.03■■■■□ 3.52
LDB1-204ENST00000490751 RCSD1Q6JBY9 416 aa37.03■■■■□ 3.52
LDB1-204ENST00000490751 TCP11L1Q9NUJ3 509 aa37.03■■■■□ 3.52
LDB1-204ENST00000490751 CHRDL2Q6WN34 429 aa37.02■■■■□ 3.52
LDB1-204ENST00000490751 DDX11Q96FC9 970 aa37.02■■■■□ 3.52
LDB1-204ENST00000490751 RNF41Q9H4P4 317 aaPredicted RBP37.02■■■■□ 3.52
LDB1-204ENST00000490751 ZNF213O14771 459 aa37.01■■■■□ 3.52
LDB1-204ENST00000490751 SEPT4O43236 478 aa37.01■■■■□ 3.52
LDB1-204ENST00000490751 PLA2G6O60733 806 aa37.01■■■■□ 3.52
LDB1-204ENST00000490751 TINF2Q9BSI4 451 aa37.01■■■■□ 3.52
LDB1-204ENST00000490751 TOP1P11387 765 aaKnown RBP37■■■■□ 3.51
LDB1-204ENST00000490751 CCDC96Q2M329 555 aa37■■■■□ 3.51
LDB1-204ENST00000490751 ANO1Q5XXA6 986 aa37■■■■□ 3.51
LDB1-204ENST00000490751 C7orf61Q8IZ16 206 aa37■■■■□ 3.51
LDB1-204ENST00000490751 TMEM47Q9BQJ4 181 aa37■■■■□ 3.51
LDB1-204ENST00000490751 DSCC1Q9BVC3 393 aa37■■■■□ 3.51
LDB1-204ENST00000490751 NEDD4P46934 1319 aa37■■■■□ 3.51
LDB1-204ENST00000490751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP36.99■■■■□ 3.514e-6■■■■□ 26
LDB1-204ENST00000490751 CHST13Q8NET6 341 aa36.99■■■■□ 3.51
LDB1-204ENST00000490751 DCAF4Q8WV16 495 aa36.99■■■■□ 3.51
LDB1-204ENST00000490751 FBXO40Q9UH90 709 aa36.99■■■■□ 3.51
LDB1-204ENST00000490751 NRBP1Q9UHY1 535 aa36.98■■■■□ 3.51
LDB1-204ENST00000490751 ZNF536O15090 1300 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 DNAJC25-GNG10A0A024R161 153 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 ANKRD35Q8N283 1001 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 ESR2Q92731 530 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 IL25Q9H293 177 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 HOMER2Q9NSB8 354 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 PRR12Q9ULL5 1215 aa36.97■■■■□ 3.51
LDB1-204ENST00000490751 DNM1LO00429 736 aa36.95■■■■□ 3.51
LDB1-204ENST00000490751 AGBL1Q96MI9 1066 aa36.95■■■■□ 3.51
LDB1-204ENST00000490751 SMCHD1A6NHR9 2005 aa36.95■■■■□ 3.51
LDB1-204ENST00000490751 SNAP25P60880 206 aa36.94■■■■□ 3.5
LDB1-204ENST00000490751 CCDC174Q6PII3 467 aa36.94■■■■□ 3.5
LDB1-204ENST00000490751 TTC14Q96N46 770 aa36.94■■■■□ 3.5
LDB1-204ENST00000490751 TAL1P17542 331 aaPredicted RBP36.93■■■■□ 3.5
LDB1-204ENST00000490751 IMMTQ16891 758 aaKnown RBP36.93■■■■□ 3.5
LDB1-204ENST00000490751 GJC2Q5T442 439 aaPredicted RBP36.93■■■■□ 3.5
LDB1-204ENST00000490751 TTBK2Q6IQ55 1244 aa36.93■■■■□ 3.5
LDB1-204ENST00000490751 MSL3Q8N5Y2 521 aaKnown RBP36.93■■■■□ 3.5
LDB1-204ENST00000490751 ARRDC4Q8NCT1 418 aa36.93■■■■□ 3.5
LDB1-204ENST00000490751 SENP6Q9GZR1 1112 aaPredicted RBP36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms