RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 CHST13Q8NET6 341 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 NEDD1Q8NHV4 660 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
CDCP1-203ENST00000490471 MTMR4Q9NYA4 1195 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
CDCP1-203ENST00000490471 NDUFB10O96000 172 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 BMP3P12645 472 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
CDCP1-203ENST00000490471 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 TFAP4Q01664 338 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 PPARAQ07869 468 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 TKFCQ3LXA3 575 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 LRIT3Q3SXY7 679 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 KIAA1755Q5JYT7 1200 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 ZMYM1Q5SVZ6 1142 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
CDCP1-203ENST00000490471 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 NUP133Q8WUM0 1156 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
CDCP1-203ENST00000490471 XPNPEP3Q9NQH7 507 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
CDCP1-203ENST00000490471 NT5C2P49902 561 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 STAT2P52630 851 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
CDCP1-203ENST00000490471 RTP1P59025 263 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
CDCP1-203ENST00000490471 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
CDCP1-203ENST00000490471 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
CDCP1-203ENST00000490471 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
CDCP1-203ENST00000490471 SYNGAP1Q96PV0 1343 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 ZNFX1Q9P2E3 1918 aaKnown RBP13.43□□□□□ -0.26
CDCP1-203ENST00000490471 M0R2C6 588 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 SLC1A4P43007 532 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 HDAC1Q13547 482 aaPredicted RBP13.43□□□□□ -0.26
CDCP1-203ENST00000490471 ZNF792Q3KQV3 632 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 PCSK9Q8NBP7 692 aaKnown RBP13.43□□□□□ -0.26
CDCP1-203ENST00000490471 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 STAG1Q8WVM7 1258 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 MPHOSPH6Q99547 160 aaKnown RBP13.43□□□□□ -0.26
CDCP1-203ENST00000490471 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
CDCP1-203ENST00000490471 PLA2G6O60733 806 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 PRDM1O75626 825 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 CHGBP05060 677 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 PCP11498 1178 aaKnown RBP13.42□□□□□ -0.26
CDCP1-203ENST00000490471 LRRC41Q15345 812 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 C1orf53Q5VUE5 145 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 RCSD1Q6JBY9 416 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 CCDC174Q6PII3 467 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDCP1-203ENST00000490471 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 PLIN4Q96Q06 1357 aa13.42□□□□□ -0.26
CDCP1-203ENST00000490471 MROH7Q68CQ1 1323 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 RLFQ13129 1914 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 ASB14A6NK59 587 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 IGHA2P01877 340 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 PGK2P07205 417 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 ADCYAP1R1P41586 468 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 PRAMEF19Q5SWL8 479 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 MAMDC4Q6UXC1 1216 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
CDCP1-203ENST00000490471 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
CDCP1-203ENST00000490471 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 B4DLN1 442 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 HIP1O00291 1037 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 ZEB2O60315 1214 aa13.4□□□□□ -0.26
CDCP1-203ENST00000490471 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms