RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TTLL1O95922 423 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 PGK2P07205 417 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 RARBP10826 455 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 MDM2Q00987 491 aaPredicted RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 PRAMEF19Q5SWL8 479 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 PI4K2BQ8TCG2 481 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
DUBR-204ENST00000490441 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
DUBR-204ENST00000490441 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 RTP1P59025 263 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 PPARAQ07869 468 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
DUBR-204ENST00000490441 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
DUBR-204ENST00000490441 MTMR4Q9NYA4 1195 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 ATP11BQ9Y2G3 1177 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 MYH4Q9Y623 1939 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
DUBR-204ENST00000490441 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 LRRC41Q15345 812 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 ZNF792Q3KQV3 632 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 ANKRD45Q5TZF3 282 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 MKL1Q969V6 931 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
DUBR-204ENST00000490441 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 AKR1A1P14550 325 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 TFAP4Q01664 338 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 RNF180Q86T96 592 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
DUBR-204ENST00000490441 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
DUBR-204ENST00000490441 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
DUBR-204ENST00000490441 FBXO40Q9UH90 709 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
DUBR-204ENST00000490441 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
DUBR-204ENST00000490441 BMP3P12645 472 aa13.35□□□□□ -0.27
DUBR-204ENST00000490441 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
DUBR-204ENST00000490441 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
DUBR-204ENST00000490441 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
DUBR-204ENST00000490441 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
DUBR-204ENST00000490441 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
DUBR-204ENST00000490441 TSPY2A6NKD2 308 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 PGK1P00558 417 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 FDX1P10109 184 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 TAL1P17542 331 aaPredicted RBP13.34□□□□□ -0.27
DUBR-204ENST00000490441 SLC1A4P43007 532 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 STAT2P52630 851 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 OAZ1P54368 228 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 CHST13Q8NET6 341 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
DUBR-204ENST00000490441 STX8Q9UNK0 236 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
DUBR-204ENST00000490441 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.28
DUBR-204ENST00000490441 HDAC1Q13547 482 aaPredicted RBP13.33□□□□□ -0.28
DUBR-204ENST00000490441 SNX17Q15036 470 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.28
DUBR-204ENST00000490441 DNAJC25-GNG10A0A024R161 153 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
DUBR-204ENST00000490441 PDE1AP54750 535 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 C1orf53Q5VUE5 145 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
DUBR-204ENST00000490441 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
DUBR-204ENST00000490441 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms