RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 RALBP1Q15311 655 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 AKAP4Q5JQC9 854 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 ALG1LQ6GMV1 187 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 SLC23A3Q6PIS1 610 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 UBE3DQ7Z6J8 389 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 ZSCAN29Q8IWY8 852 aaPredicted RBP4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 FBXO15Q8NCQ5 510 aaPredicted RBP4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 GRIN3AQ8TCU5 1115 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 GAL3ST3Q96A11 431 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 SLC26A8Q96RN1 970 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 NLRP2Q9NX02 1062 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 PITPNM2Q9BZ72 1349 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 ADGRB2O60241 1585 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 MAP2P11137 1827 aaKnown RBP4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 TRPM3Q9HCF6 1732 aaPredicted RBP4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 FBXO24O75426 580 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 USP17L7P0C7H9 530 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 GSTT1P30711 240 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 PRKCQQ04759 706 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 PTPN11Q06124 597 aaPredicted RBP4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 MAP7Q14244 749 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 NFIXQ14938 502 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 MPZL3Q6UWV2 235 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 FAM214BQ7L5A3 538 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 NETO1Q8TDF5 533 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 GPBAR1Q8TDU6 330 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 ZC3H12CQ9C0D7 883 aaKnown RBP4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 ZCCHC4Q9H5U6 513 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 RCAN3Q9UKA8 241 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 DLG5Q8TDM6 1919 aa4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 MYBBP1AQ9BQG0 1328 aaKnown RBP4.44□□□□□ -1.7
CRNKL1-203ENST00000490258 NLRP1Q9C000 1473 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ROBO2Q9HCK4 1378 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ANKRD33BA6NCL7 494 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 GIPC1O14908 333 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 NUAK1O60285 661 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 PRPF40AO75400 957 aaKnown RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 LDHBP07195 334 aaKnown RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ADRB1P08588 477 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 CTSHP09668 335 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 GNA15P30679 374 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ID3Q02535 119 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 SKOR2Q2VWA4 1001 aaPredicted RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 HP1BP3Q5SSJ5 553 aaPredicted RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 OGFOD3Q6PK18 319 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 TPTE2Q6XPS3 522 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ATG14Q6ZNE5 492 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 PLD6Q8N2A8 252 aaKnown RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 EXOC6Q8TAG9 804 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 CARD11Q9BXL7 1154 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 ZFYVE1Q9HBF4 777 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 GPN3Q9UHW5 284 aaPredicted RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 AP4E1Q9UPM8 1137 aa4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 LAS1LQ9Y4W2 734 aaKnown RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 YTHDC2Q9H6S0 1430 aaKnown RBP4.43□□□□□ -1.7
CRNKL1-203ENST00000490258 TMEM2Q9UHN6 1383 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ST20-MTHFSA0A0A6YYL1 179 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 PATL2C9JE40 543 aaKnown RBP4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 RBAK-RBAKDNI3L0D1 243 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 OVOL3O00110 214 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 NPHP4O75161 1426 aaPredicted RBP4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 GLI1P08151 1106 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 RAB6AP20340 208 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ASPAP45381 313 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ERVK-24P63145 666 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 TAGLNQ01995 201 aaKnown RBP4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 PDE3AQ14432 1141 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 TTLL4Q14679 1199 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 TMCO4Q5TGY1 634 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 CDC42BPGQ6DT37 1551 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 DYMQ7RTS9 669 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 WAPLQ7Z5K2 1190 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 AEBP1Q8IUX7 1158 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 DDX54Q8TDD1 881 aaKnown RBP4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 FRAT1Q92837 279 aaPredicted RBP4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ISL2Q96A47 359 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 FAM8A1Q9UBU6 413 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 AKAP2Q9Y2D5 859 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ATP7BP35670 1465 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 WNK3Q9BYP7 1800 aa4.42□□□□□ -1.7
CRNKL1-203ENST00000490258 ROBO1Q9Y6N7 1651 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 GPRASP1Q5JY77 1395 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 TCAF2A6NFQ2 919 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 TRIM37O94972 964 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 MED14OSP0DP75 135 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 BMP7P18075 431 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 PPP2R3AQ06190 1150 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 ANGEL2Q5VTE6 544 aaKnown RBP4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 FYB2Q5VWT5 728 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 PCNX4Q63HM2 1172 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 SCARA3Q6AZY7 606 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 CXorf38Q8TB03 319 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 DUSP9Q99956 384 aaKnown RBP4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 ATXN3LQ9H3M9 355 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 CD163L1Q9NR16 1453 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 DLC1Q96QB1 1528 aa4.41□□□□□ -1.7
CRNKL1-203ENST00000490258 EIF3AQ14152 1382 aaKnown RBP4.4□□□□□ -1.7
CRNKL1-203ENST00000490258 NHSL1Q5SYE7 1610 aa4.4□□□□□ -1.7
CRNKL1-203ENST00000490258 EIF5BO60841 1220 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms