RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 C14orf80Q86SX3 495 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
RTN1-207ENST00000490111 KIAA0825Q8IV33 1275 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 C1orf131Q8NDD1 294 aaKnown RBP5.4□□□□□ -1.54
RTN1-207ENST00000490111 CXorf38Q8TB03 319 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 ADAM32Q8TC27 787 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 ATXN2LQ8WWM7 1075 aaKnown RBP5.4□□□□□ -1.54
RTN1-207ENST00000490111 UHRF1Q96T88 793 aaPredicted RBP5.4□□□□□ -1.54
RTN1-207ENST00000490111 EYA3Q99504 573 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 SPON2Q9BUD6 331 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 UNC93B1Q9H1C4 597 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 ZHX3Q9H4I2 956 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 GINM1Q9NU53 330 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 SRRDQ9UH36 339 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 INTUQ9ULD6 942 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 NSFL1CQ9UNZ2 370 aaKnown RBP5.4□□□□□ -1.54
RTN1-207ENST00000490111 EFR3BQ9Y2G0 817 aa5.4□□□□□ -1.54
RTN1-207ENST00000490111 FAM205AQ6ZU69 1335 aa5.4□□□□□ -1.55
RTN1-207ENST00000490111 VCANP13611 3396 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 CACNA1AO00555 2505 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 CCDC163A0A0D9SF12 145 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 GNAT3A8MTJ3 354 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 TRIM6-TRIM34B2RNG4 842 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 PPP1R12BO60237 982 aaPredicted RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 TLR2O60603 784 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 LDHCP07864 332 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 CNGA1P29973 690 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 PRKAR2BP31323 418 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 IFRD2Q12894 506 aaPredicted RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 GRAPQ13588 217 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 GRAMD1BQ3KR37 738 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 CCDC174Q6PII3 467 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 DDX46Q7L014 1031 aaKnown RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 PPP1R42Q7Z4L9 355 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 THNSL2Q86YJ6 484 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 PDILTQ8N807 584 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 TTC8Q8TAM2 541 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 GRAPLQ8TC17 118 aaPredicted RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 GPKOWQ92917 476 aaPredicted RBP eCLIP5.39□□□□□ -1.55
RTN1-207ENST00000490111 E2F7Q96AV8 911 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 THUMPD2Q9BTF0 503 aaKnown RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 ZC3H12CQ9C0D7 883 aaKnown RBP5.39□□□□□ -1.55
RTN1-207ENST00000490111 KBTBD4Q9NVX7 518 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 ZNF69Q9UC07 566 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 POLLQ9UGP5 575 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 ADAMTS1Q9UHI8 967 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 POLIQ9UNA4 740 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 UBN2Q6ZU65 1347 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 CENPFP49454 3210 aa5.39□□□□□ -1.55
RTN1-207ENST00000490111 BTBD11A6QL63 1104 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 WNT10BO00744 389 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 PTMAP06454 111 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 SNRPA1P09661 255 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 CALRP27797 417 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 CTGFP29279 349 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 STAT3P40763 770 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 PSMC4P43686 418 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 GPSM2P81274 684 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 ORC1Q13415 861 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 RASGRF1Q13972 1273 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 TCEA2Q15560 299 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 IER5LQ5T953 404 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 APOBEC3FQ8IUX4 373 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 ZNF34Q8IZ26 560 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 FAM43AQ8N2R8 423 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 PAF1Q8N7H5 531 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 CELF2-AS1Q8N7Q2 184 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 USP38Q8NB14 1042 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
RTN1-207ENST00000490111 ENOX1Q8TC92 643 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 DIS3LQ8TF46 1054 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 SCG3Q8WXD2 468 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 BRI3BPQ8WY22 251 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 DEFB118Q96PH6 123 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 OSBPL7Q9BZF2 842 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 TTYH1Q9H313 450 aaPredicted RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 ZNF358Q9NW07 568 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 KCNG1Q9UIX4 513 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 MRPS23Q9Y3D9 190 aaKnown RBP5.38□□□□□ -1.55
RTN1-207ENST00000490111 NUP98P52948 1817 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 MYPNQ86TC9 1320 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 LAMA3Q16787 3333 aa5.38□□□□□ -1.55
RTN1-207ENST00000490111 LRRC37AA6NMS7 1700 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 SCN9AQ15858 1988 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 CCL15-CCL14A0A0B4J2E2 113 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 ZBTB39O15060 712 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TRAPPC10P48553 1259 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 MORC3Q14149 939 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 SIM2Q14190 667 aaPredicted RBP5.37□□□□□ -1.55
RTN1-207ENST00000490111 CCL15Q16663 113 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TM4SF20Q53R12 229 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TMEM31Q5JXX7 168 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 COX20Q5RI15 118 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 SWT1Q5T5J6 900 aaKnown RBP5.37□□□□□ -1.55
RTN1-207ENST00000490111 ERAP2Q6P179 960 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms