RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SLC38A10Q9HBR0 1119 aa14.09□□□□□ -0.15
SRSF4-204ENST00000489898 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
SRSF4-204ENST00000489898 HELLSQ9NRZ9 838 aa14.09□□□□□ -0.15
SRSF4-204ENST00000489898 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
SRSF4-204ENST00000489898 NEDD4P46934 1319 aa14.09□□□□□ -0.15
SRSF4-204ENST00000489898 CCDC171Q6TFL3 1326 aa14.09□□□□□ -0.15
SRSF4-204ENST00000489898 TRANK1O15050 2925 aa14.08□□□□□ -0.15
SRSF4-204ENST00000489898 STRNO43815 780 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 TTLL1O95922 423 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 FGAP02671 866 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 PGK2P07205 417 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 ATP2B2Q01814 1243 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 WDR78Q5VTH9 848 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 TICAM2Q86XR7 235 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 HTATIP2Q9BUP3 242 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.16
SRSF4-204ENST00000489898 SOX1O00570 391 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-204ENST00000489898 ZNF865P0CJ78 1059 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-204ENST00000489898 TFAP4Q01664 338 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 SNX17Q15036 470 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
SRSF4-204ENST00000489898 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 TEX13BQ9BXU2 312 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 A0A0C4DFX4 3053 aa14.07□□□□□ -0.16
SRSF4-204ENST00000489898 PTPRSQ13332 1948 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 SCN10AQ9Y5Y9 1956 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 SLC25A27O95847 323 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 STAT3P40763 770 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 MCMDC2Q4G0Z9 681 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 PRAMEF19Q5SWL8 479 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
SRSF4-204ENST00000489898 B4GALNT3Q6L9W6 998 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 NCAPG2Q86XI2 1143 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 IVNS1ABPQ9Y6Y0 642 aa14.06□□□□□ -0.16
SRSF4-204ENST00000489898 SEPT4O43236 478 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
SRSF4-204ENST00000489898 APPP05067 770 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 SDSP20132 328 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 PLS1Q14651 629 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
SRSF4-204ENST00000489898 ANO1Q5XXA6 986 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 DPF3Q92784 378 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 NACAP1Q9BZK3 213 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 SUPT16HQ9Y5B9 1047 aaKnown RBP14.05□□□□□ -0.16
SRSF4-204ENST00000489898 DOCK5Q9H7D0 1870 aa14.05□□□□□ -0.16
SRSF4-204ENST00000489898 DNM1LO00429 736 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 PLA2G6O60733 806 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 ADAMTS4O75173 837 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 TSPY3P0CV98 308 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 TSPY8P0CW00 308 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 SNHG28P0DPA3 235 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 FCER1AP12319 257 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
SRSF4-204ENST00000489898 PDE4BQ07343 736 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 MFSD14CQ5VZR4 134 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 PRPF38AQ8NAV1 312 aaKnown RBP14.04□□□□□ -0.16
SRSF4-204ENST00000489898 STAG1Q8WVM7 1258 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 MMP19Q99542 508 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 TINF2Q9BSI4 451 aa14.04□□□□□ -0.16
SRSF4-204ENST00000489898 RAVER2Q9HCJ3 691 aaKnown RBP14.04□□□□□ -0.16
SRSF4-204ENST00000489898 DIS3Q9Y2L1 958 aaKnown RBP14.04□□□□□ -0.16
SRSF4-204ENST00000489898 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
SRSF4-204ENST00000489898 CTAGE5O15320 804 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 EVI5O60447 810 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 BMP3P12645 472 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 OAZ1P54368 228 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 HAND2P61296 217 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 CCSAPQ6IQ19 270 aaPredicted RBP14.03□□□□□ -0.16
SRSF4-204ENST00000489898 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
SRSF4-204ENST00000489898 FAM133AQ8N9E0 248 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 ZMYND8Q9ULU4 1186 aaPredicted RBP14.03□□□□□ -0.16
SRSF4-204ENST00000489898 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
SRSF4-204ENST00000489898 MUC3AQ02505 3323 aa14.02□□□□□ -0.16
SRSF4-204ENST00000489898 SCN5AQ14524 2016 aa14.02□□□□□ -0.16
SRSF4-204ENST00000489898 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 MYADML2A6NDP7 307 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 MSCO60682 206 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 SYN1P17600 705 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 BMP8BP34820 402 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 MAGEA10P43363 369 aaPredicted RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 LRRC41Q15345 812 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 GJC2Q5T442 439 aaPredicted RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 BTNL9Q6UXG8 535 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 DPP9Q86TI2 863 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 ZNF444Q8N0Y2 327 aaPredicted RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 AGBL1Q96MI9 1066 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 RWDD1Q9H446 243 aaPredicted RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 A1CFQ9NQ94 594 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms