RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 FAM160B2Q86V87 743 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
TRIM40-208ENST00000489892 WDR18Q9BV38 432 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
TRIM40-208ENST00000489892 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
TRIM40-208ENST00000489892 RIOX1Q9H6W3 641 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 VCPKMTQ9H867 229 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
TRIM40-208ENST00000489892 ATAD5Q96QE3 1844 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 C19orf81C9J6K1 198 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 RAD21O60216 631 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 PLA2G6O60733 806 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
TRIM40-208ENST00000489892 NDUFB10O96000 172 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 MMP1P03956 469 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 BMP3P12645 472 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 NCLP19338 710 aaKnown RBP13.42□□□□□ -0.26
TRIM40-208ENST00000489892 CST9Q5W186 159 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 ARMC9Q7Z3E5 817 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 CLEC10AQ8IUN9 316 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 CDAN1Q8IWY9 1227 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 CHURC1Q8WUH1 139 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 ZNF408Q9H9D4 720 aa13.42□□□□□ -0.26
TRIM40-208ENST00000489892 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
TRIM40-208ENST00000489892 GNA11P29992 359 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 STAT2P52630 851 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
TRIM40-208ENST00000489892 RESTQ13127 1097 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 RRP1BQ14684 758 aaKnown RBP13.41□□□□□ -0.26
TRIM40-208ENST00000489892 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
TRIM40-208ENST00000489892 BTNL9Q6UXG8 535 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
TRIM40-208ENST00000489892 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
TRIM40-208ENST00000489892 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 ESYT2A0FGR8 921 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 USP17L10C9JJH3 530 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 GOLGA8HP0CJ92 632 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 FDX1P10109 184 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 KRT2P35908 639 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 MAP2K2P36507 400 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 NASPP49321 788 aaPredicted RBP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 NLRP5P59047 1200 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 FKBP1BP68106 108 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 KIF23Q02241 960 aaPredicted RBP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 PKN1Q16512 942 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 HS1BP3Q53T59 392 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 ANKRD13AQ8IZ07 590 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 TMEM87AQ8NBN3 555 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 ZNF280CQ8ND82 737 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 CDCA5Q96FF9 252 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 GLIS2Q9BZE0 524 aaPredicted RBP13.4□□□□□ -0.26
TRIM40-208ENST00000489892 MCOLN1Q9GZU1 580 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 BARHL2Q9NY43 387 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
TRIM40-208ENST00000489892 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.27
TRIM40-208ENST00000489892 ZBTB5O15062 677 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 CA12O43570 354 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 AOC2O75106 756 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 PTPRAP18433 802 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 INPP5BP32019 993 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 CLCN1P35523 988 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 FOSBP53539 338 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 JAG1P78504 1218 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 MAP3K11Q16584 847 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 NOSTRINQ8IVI9 506 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
TRIM40-208ENST00000489892 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
TRIM40-208ENST00000489892 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
TRIM40-208ENST00000489892 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 ELP1O95163 1332 aa13.39□□□□□ -0.27
TRIM40-208ENST00000489892 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
TRIM40-208ENST00000489892 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
TRIM40-208ENST00000489892 DLL1O00548 723 aa13.38□□□□□ -0.27
TRIM40-208ENST00000489892 CYTH3O43739 400 aa13.38□□□□□ -0.27
TRIM40-208ENST00000489892 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms