RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
GABBR1-217ENST00000489839 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 NMIQ13287 307 aaPredicted RBP13.15□□□□□ -0.3
GABBR1-217ENST00000489839 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
GABBR1-217ENST00000489839 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
GABBR1-217ENST00000489839 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 FGD4Q96M96 766 aa13.15□□□□□ -0.3
GABBR1-217ENST00000489839 LAMA3Q16787 3333 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 LCTP09848 1927 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 SEPT4O43236 478 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 MSCO60682 206 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
GABBR1-217ENST00000489839 SNAP25P60880 206 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 PDE4BQ07343 736 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 KCTD2Q14681 263 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 PRPF38AQ8NAV1 312 aaKnown RBP13.14□□□□□ -0.31
GABBR1-217ENST00000489839 TINF2Q9BSI4 451 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
GABBR1-217ENST00000489839 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 DNM1LO00429 736 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
GABBR1-217ENST00000489839 FGAP02671 866 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 FGRP09769 529 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 BMP3P12645 472 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 MCCP23508 829 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 BMP8BP34820 402 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
GABBR1-217ENST00000489839 LRRC41Q15345 812 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ALX1Q15699 326 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 DNAH12Q6ZR08 3092 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 ZNF536O15090 1300 aa13.13□□□□□ -0.31
GABBR1-217ENST00000489839 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
GABBR1-217ENST00000489839 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
GABBR1-217ENST00000489839 NOVP48745 357 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 RTP1P59025 263 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
GABBR1-217ENST00000489839 NUCB1Q02818 461 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
GABBR1-217ENST00000489839 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
GABBR1-217ENST00000489839 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
GABBR1-217ENST00000489839 A0A1W2PPC1 479 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 TRIM6-TRIM34B2RNG4 842 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 ADCY6O43306 1168 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 ORC4O43929 436 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
GABBR1-217ENST00000489839 ZBED4O75132 1171 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 PGK1P00558 417 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
GABBR1-217ENST00000489839 ADCYAP1R1P41586 468 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 HAND2P61296 217 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABBR1-217ENST00000489839 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
GABBR1-217ENST00000489839 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
GABBR1-217ENST00000489839 SDSP20132 328 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 COPB2P35606 906 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 SLC1A4P43007 532 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 DDX11Q96FC9 970 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 ISY1Q9ULR0 285 aaKnown RBP13.1□□□□□ -0.31
GABBR1-217ENST00000489839 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
GABBR1-217ENST00000489839 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
GABBR1-217ENST00000489839 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 ADAMTS4O75173 837 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 PTGS1P23219 599 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 STAT2P52630 851 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 SNX17Q15036 470 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
GABBR1-217ENST00000489839 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms