RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
GGPS1-207ENST00000489692 RBBP6Q7Z6E9 1792 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 RANBP6O60518 1105 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 MSCO60682 206 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 COBLO75128 1261 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 COPB2P35606 906 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 RRP12Q5JTH9 1297 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 SLFN13Q68D06 897 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
GGPS1-207ENST00000489692 DDX20Q9UHI6 824 aaKnown RBP13.86□□□□□ -0.19
GGPS1-207ENST00000489692 PGK2P07205 417 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 CHMLP26374 656 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 MCMDC2Q4G0Z9 681 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 OLFML2BQ68BL8 750 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
GGPS1-207ENST00000489692 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 TEX13BQ9BXU2 312 aa13.85□□□□□ -0.19
GGPS1-207ENST00000489692 IGKV6D-41A0A0C4DH26 115 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 BMP3P12645 472 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 SYN1P17600 705 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 ANAPC15P60006 121 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-207ENST00000489692 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 LHX8Q68G74 356 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 SENP6Q9GZR1 1112 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-207ENST00000489692 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
GGPS1-207ENST00000489692 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 FEM1BQ9UK73 627 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 MGAMO43451 1857 aa13.84□□□□□ -0.19
GGPS1-207ENST00000489692 TMEM232C9JQI7 657 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 MCCP23508 829 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 SLC1A4P43007 532 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 TRPV1Q8NER1 839 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 MAML3Q96JK9 1138 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
GGPS1-207ENST00000489692 ZNF214Q9UL59 606 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-207ENST00000489692 ADAMTS5Q9UNA0 930 aa13.83□□□□□ -0.2
GGPS1-207ENST00000489692 KBTBD13C9JR72 458 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 CYBAP13498 195 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-207ENST00000489692 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-207ENST00000489692 HAND2P61296 217 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 CCDC96Q2M329 555 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-207ENST00000489692 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 ARRDC4Q8NCT1 418 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 MKL1Q969V6 931 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 SYNPO2Q9UMS6 1093 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
GGPS1-207ENST00000489692 SEPT4O43236 478 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 NMT2O60551 498 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 FGAP02671 866 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 STAT2P52630 851 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 KCTD1Q719H9 257 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 REPS2Q8NFH8 660 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 CHURC1Q8WUH1 139 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.2
GGPS1-207ENST00000489692 PFASO15067 1338 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
GGPS1-207ENST00000489692 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 FOXP2O15409 715 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 ST18O60284 1047 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 FXR1P51114 621 aaKnown RBP eCLIP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 ALX1Q15699 326 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 LRRC26Q2I0M4 334 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 CCDC174Q6PII3 467 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 FAM160B2Q86V87 743 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 TINF2Q9BSI4 451 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-207ENST00000489692 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
GGPS1-207ENST00000489692 DNM1LO00429 736 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 ORC4O43929 436 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
GGPS1-207ENST00000489692 RARBP10826 455 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 MCM2P49736 904 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 SNAP25P60880 206 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 ZNF792Q3KQV3 632 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
GGPS1-207ENST00000489692 GMCL1Q96IK5 515 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms