RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
CSF3R-213ENST00000489551 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 F5H6K3 240 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 M0R2C6 588 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 RAD21O60216 631 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 NDUFB10O96000 172 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 RARBP10826 455 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 KLRC3Q07444 240 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 KCTD2Q14681 263 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 ZSCAN25Q6NSZ9 544 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 KBTBD3Q8NAB2 608 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
CSF3R-213ENST00000489551 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
CSF3R-213ENST00000489551 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 KIAA0355O15063 1070 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 PRDM1O75626 825 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 FAAP100Q0VG06 881 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 SNRNP48Q6IEG0 339 aaKnown RBP12.06□□□□□ -0.48
CSF3R-213ENST00000489551 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 MAMDC4Q6UXC1 1216 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 SEC62Q99442 399 aaKnown RBP12.06□□□□□ -0.48
CSF3R-213ENST00000489551 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 SYNRGQ9UMZ2 1314 aa12.06□□□□□ -0.48
CSF3R-213ENST00000489551 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 RNF113AO15541 343 aaKnown RBP12.05□□□□□ -0.48
CSF3R-213ENST00000489551 GPAA1O43292 621 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 CLTBP09497 229 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 AKR1A1P14550 325 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 ZNF697Q5TEC3 545 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSF3R-213ENST00000489551 RNF180Q86T96 592 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSF3R-213ENST00000489551 CPXCR1Q8N123 301 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 APPBP2Q92624 585 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 MKL1Q969V6 931 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 DDRGK1Q96HY6 314 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 RAVER2Q9HCJ3 691 aaKnown RBP12.05□□□□□ -0.48
CSF3R-213ENST00000489551 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 REV3LO60673 3130 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
CSF3R-213ENST00000489551 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 CTAGE5O15320 804 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 FOXP2O15409 715 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 ACLYP53396 1101 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 SMAD3P84022 425 aaKnown RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 KCNA10Q16322 511 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 ANKRD33Q7Z3H0 272 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 OTUD7AQ8TE49 926 aaPredicted RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 MYLIPQ8WY64 445 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
CSF3R-213ENST00000489551 SLC38A10Q9HBR0 1119 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
CSF3R-213ENST00000489551 PTGS1P23219 599 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 COPB2P35606 906 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 CDK7P50613 346 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 C16orf59Q7L2K0 433 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
CSF3R-213ENST00000489551 PI4K2BQ8TCG2 481 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
CSF3R-213ENST00000489551 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
CSF3R-213ENST00000489551 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 DDX49Q9Y6V7 483 aaKnown RBP12.03□□□□□ -0.48
CSF3R-213ENST00000489551 ZNF536O15090 1300 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 PLIN4Q96Q06 1357 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 CHD7Q9P2D1 2997 aa12.03□□□□□ -0.48
CSF3R-213ENST00000489551 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
CSF3R-213ENST00000489551 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
CSF3R-213ENST00000489551 RAG1P15918 1043 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 ACVR2BQ13705 512 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
CSF3R-213ENST00000489551 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
CSF3R-213ENST00000489551 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.49
CSF3R-213ENST00000489551 STARD7Q9NQZ5 370 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.49
CSF3R-213ENST00000489551 TBX21Q9UL17 535 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms