RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SOX10P56693 466 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 ABRAQ8N0Z2 381 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 TEX13BQ9BXU2 312 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 KAT14Q9H8E8 782 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 ZSWIM8A7E2V4 1837 aa20.37■□□□□ 0.85
MDC1-206ENST00000489540 RGS19P49795 217 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 OAZ1P54368 228 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 GRB14Q14449 540 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
MDC1-206ENST00000489540 CHMP4CQ96CF2 233 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 TNKSO95271 1327 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 PDHBP11177 359 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 FCER1AP12319 257 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 NECTIN1Q15223 517 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 APBA2Q99767 749 aa20.36■□□□□ 0.85
MDC1-206ENST00000489540 SLC27A2O14975 620 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 HMGCRP04035 888 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 INHAP05111 366 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 HOXC6P09630 235 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 SNHG28P0DPA3 235 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 IFIT1BQ5T764 474 aaKnown RBP20.35■□□□□ 0.85
MDC1-206ENST00000489540 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 CPXCR1Q8N123 301 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 SLC5A4Q9NY91 659 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
MDC1-206ENST00000489540 ERICH2A1L162 156 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 MYCP01106 439 aaPredicted RBP20.34■□□□□ 0.85
MDC1-206ENST00000489540 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
MDC1-206ENST00000489540 MTFR1Q15390 333 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
MDC1-206ENST00000489540 SNRNP48Q6IEG0 339 aaKnown RBP20.34■□□□□ 0.85
MDC1-206ENST00000489540 STOX1Q6ZVD7 989 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 RAVER2Q9HCJ3 691 aaKnown RBP20.34■□□□□ 0.85
MDC1-206ENST00000489540 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 PRR12Q9ULL5 1215 aa20.34■□□□□ 0.85
MDC1-206ENST00000489540 RLFQ13129 1914 aa20.33■□□□□ 0.85
MDC1-206ENST00000489540 IFIT3O14879 490 aaKnown RBP20.33■□□□□ 0.84
MDC1-206ENST00000489540 CCL5P13501 91 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.84
MDC1-206ENST00000489540 ADORA2AP29274 412 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 ZNF543Q08ER8 600 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 SEC23AQ15436 765 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 TTBK2Q6IQ55 1244 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 MMP19Q99542 508 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 MGAMO43451 1857 aa20.33■□□□□ 0.84
MDC1-206ENST00000489540 KCTD2Q14681 263 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 RASGRP2Q7LDG7 609 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 TRIB2Q92519 343 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 MTA3Q9BTC8 594 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 RNF208Q9H0X6 261 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 FBXO40Q9UH90 709 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 FRMPD2Q68DX3 1309 aaPredicted RBP20.32■□□□□ 0.84
MDC1-206ENST00000489540 LAMA4Q16363 1823 aa20.32■□□□□ 0.84
MDC1-206ENST00000489540 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 POTEFA5A3E0 1075 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 SLC16A2P36021 539 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 SLC4A3P48751 1232 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 SYDE2Q5VT97 1194 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 MB21D2Q8IYB1 491 aaPredicted RBP20.31■□□□□ 0.84
MDC1-206ENST00000489540 CHST13Q8NET6 341 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 RIPK3Q9Y572 518 aa20.31■□□□□ 0.84
MDC1-206ENST00000489540 REC8O95072 547 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 GJB1P08034 283 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 TKFCQ3LXA3 575 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 UNC93B1Q9H1C4 597 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 PNMA2Q9UL42 364 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
MDC1-206ENST00000489540 RPTORQ8N122 1335 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 COBLO75128 1261 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 CAPN2P17655 700 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 MCM5P33992 734 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 WTAPQ15007 396 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 CCL14Q16627 93 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 TSGA10IPQ3SY00 556 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 ASPRV1Q53RT3 343 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 TMEM67Q5HYA8 995 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 NPLOC4Q8TAT6 608 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 RANBP17Q9H2T7 1088 aaKnown RBP20.29■□□□□ 0.84
MDC1-206ENST00000489540 HMX1Q9NP08 348 aaPredicted RBP20.29■□□□□ 0.84
MDC1-206ENST00000489540 DOCK3Q8IZD9 2030 aa20.29■□□□□ 0.84
MDC1-206ENST00000489540 ZNF536O15090 1300 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
MDC1-206ENST00000489540 EN2P19622 333 aaPredicted RBP20.28■□□□□ 0.84
MDC1-206ENST00000489540 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 OLFML2BQ68BL8 750 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 CCDC174Q6PII3 467 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.28■□□□□ 0.84
MDC1-206ENST00000489540 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
MDC1-206ENST00000489540 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms