RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SLC12A7Q9Y666 1083 aa22.5■■□□□ 1.19
CCM2-216ENST00000488727 A0A0G2JMZ2 1700 aa22.5■■□□□ 1.19
CCM2-216ENST00000488727 ADGRA2Q96PE1 1338 aa22.5■■□□□ 1.19
CCM2-216ENST00000488727 TMEM232C9JQI7 657 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 CA12O43570 354 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 DDAH1O94760 285 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 RXRAP19793 462 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 MRE11P49959 708 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 TTBK2Q6IQ55 1244 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 NUP133Q8WUM0 1156 aa22.49■■□□□ 1.19
CCM2-216ENST00000488727 LARP6Q9BRS8 491 aaKnown RBP22.49■■□□□ 1.19
CCM2-216ENST00000488727 COL11A1P12107 1806 aaPredicted RBP22.49■■□□□ 1.19
CCM2-216ENST00000488727 KLF18A0A0U1RQI7 1052 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 SPDYE16A6NNV3 312 aaPredicted RBP22.48■■□□□ 1.19
CCM2-216ENST00000488727 HERVK_113P62684 666 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 COG2Q14746 738 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 GRM4Q14833 912 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 NOL8Q76FK4 1167 aaKnown RBP22.48■■□□□ 1.19
CCM2-216ENST00000488727 STAG2Q8N3U4 1231 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 ALDH8A1Q9H2A2 487 aaPredicted RBP22.48■■□□□ 1.19
CCM2-216ENST00000488727 GPCPD1Q9NPB8 672 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 MAD2L2Q9UI95 211 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 TBC1D8O95759 1140 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 SAMD1Q6SPF0 538 aaPredicted RBP22.48■■□□□ 1.19
CCM2-216ENST00000488727 MICU3Q86XE3 530 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
CCM2-216ENST00000488727 CFHR5Q9BXR6 569 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 FEM1BQ9UK73 627 aa22.48■■□□□ 1.19
CCM2-216ENST00000488727 PARP1P09874 1014 aaKnown RBP22.47■■□□□ 1.19
CCM2-216ENST00000488727 DSG3P32926 999 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 SLC16A2P36021 539 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 STAT2P52630 851 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 EVCP57679 992 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 ATG4CQ96DT6 458 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 ZSCAN31Q96LW9 406 aaPredicted RBP22.47■■□□□ 1.19
CCM2-216ENST00000488727 SLF1Q9BQI6 1058 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 ZFYVE28Q9HCC9 887 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 SAGE1Q9NXZ1 904 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 PPP1R9AQ9ULJ8 1098 aa22.47■■□□□ 1.19
CCM2-216ENST00000488727 DDX49Q9Y6V7 483 aaKnown RBP22.47■■□□□ 1.19
CCM2-216ENST00000488727 PALM3A6NDB9 673 aaPredicted RBP22.46■■□□□ 1.19
CCM2-216ENST00000488727 TLR2O60603 784 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 PEX10O60683 326 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 PLA2G6O60733 806 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
CCM2-216ENST00000488727 ASPRV1Q53RT3 343 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 GPATCH4Q5T3I0 446 aaKnown RBP22.46■■□□□ 1.19
CCM2-216ENST00000488727 CCDC144CPQ8IYA2 1237 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 MYPNQ86TC9 1320 aa22.46■■□□□ 1.19
CCM2-216ENST00000488727 BTNL9Q6UXG8 535 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 LBX2Q6XYB7 198 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 MAP3K14Q99558 947 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 BEGAINQ9BUH8 593 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 HOXC10Q9NYD6 342 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 TSKSQ9UJT2 592 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 ADAMTS5Q9UNA0 930 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 HPS5Q9UPZ3 1129 aa22.45■■□□□ 1.19
CCM2-216ENST00000488727 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.45■■□□□ 1.19
CCM2-216ENST00000488727 ZBTB43O43298 467 aa22.45■■□□□ 1.18
CCM2-216ENST00000488727 IKQ13123 557 aaPredicted RBP22.45■■□□□ 1.18
CCM2-216ENST00000488727 PRPF38AQ8NAV1 312 aaKnown RBP22.45■■□□□ 1.18
CCM2-216ENST00000488727 KIFC2Q96AC6 838 aa22.45■■□□□ 1.18
CCM2-216ENST00000488727 UBA5Q9GZZ9 404 aa22.45■■□□□ 1.18
CCM2-216ENST00000488727 TXNRD2Q9NNW7 524 aa22.45■■□□□ 1.18
CCM2-216ENST00000488727 SH2B1Q9NRF2 756 aaPredicted RBP22.45■■□□□ 1.18
CCM2-216ENST00000488727 CPA4Q9UI42 421 aa22.45■■□□□ 1.18
CCM2-216ENST00000488727 NAP1L2Q9ULW6 460 aaPredicted RBP22.45■■□□□ 1.18
CCM2-216ENST00000488727 GOLGA8BA8MQT2 603 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 CALM1P0DP23 149 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 CALM2P0DP24 149 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 CALM3P0DP25 149 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 SLC35G1Q2M3R5 365 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 SYNE3Q6ZMZ3 975 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 FAM160B2Q86V87 743 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 FANCBQ8NB91 859 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 RBPJLQ9UBG7 517 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 PRR12Q9ULL5 1215 aa22.44■■□□□ 1.18
CCM2-216ENST00000488727 KLRF2D3W0D1 207 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 VWA5AO00534 786 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 PDIA3P30101 505 aaKnown RBP22.43■■□□□ 1.18
CCM2-216ENST00000488727 RCAN1P53805 252 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 C17orf99Q6UX52 265 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 NBPF11Q86T75 865 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 CTCFLQ8NI51 663 aaPredicted RBP22.43■■□□□ 1.18
CCM2-216ENST00000488727 GRPEL1Q9HAV7 217 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 TPCN1Q9ULQ1 816 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 BAZ2BQ9UIF8 2168 aaKnown RBP22.43■■□□□ 1.18
CCM2-216ENST00000488727 CNMDO75829 334 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 BCRP11274 1271 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 GCLCP48506 637 aaPredicted RBP22.43■■□□□ 1.18
CCM2-216ENST00000488727 SYDE2Q5VT97 1194 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 ANKRD13CQ8N6S4 541 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 BTBD7Q9P203 1132 aa22.43■■□□□ 1.18
CCM2-216ENST00000488727 NID2Q14112 1375 aa22.42■■□□□ 1.18
CCM2-216ENST00000488727 GOLGA8AA7E2F4 631 aa22.42■■□□□ 1.18
CCM2-216ENST00000488727 PLEKHA8P1O95397 391 aa22.42■■□□□ 1.18
CCM2-216ENST00000488727 KIF5BP33176 963 aa22.42■■□□□ 1.18
CCM2-216ENST00000488727 ANKRD1Q15327 319 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms