RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CHRDL2Q6WN34 429 aa27.39■■□□□ 1.98
CUL4A-209ENST00000488558 GMCL1Q96IK5 515 aa27.39■■□□□ 1.98
CUL4A-209ENST00000488558 FDX1P10109 184 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 BMP3P12645 472 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 SNRNP48Q6IEG0 339 aaKnown RBP27.38■■□□□ 1.97
CUL4A-209ENST00000488558 RILPL2Q969X0 211 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 PRO3102Q9H379 93 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 SLC38A10Q9HBR0 1119 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 NRBP1Q9UHY1 535 aa27.38■■□□□ 1.97
CUL4A-209ENST00000488558 ZBED4O75132 1171 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 FGAP02671 866 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 HSPD1P10809 573 aaKnown RBP27.37■■□□□ 1.97
CUL4A-209ENST00000488558 CNGA1P29973 690 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 NOVP48745 357 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 OAZ1P54368 228 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 MFAP1P55081 439 aaKnown RBP27.37■■□□□ 1.97
CUL4A-209ENST00000488558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.37■■□□□ 1.97
CUL4A-209ENST00000488558 ZNF589Q86UQ0 364 aaPredicted RBP27.37■■□□□ 1.97
CUL4A-209ENST00000488558 SUPT16HQ9Y5B9 1047 aaKnown RBP27.37■■□□□ 1.97
CUL4A-209ENST00000488558 LAMA4Q16363 1823 aa27.37■■□□□ 1.97
CUL4A-209ENST00000488558 SEPT4O43236 478 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 SDSP20132 328 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 ZNF792Q3KQV3 632 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 KIFC2Q96AC6 838 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 IL17RBQ9NRM6 502 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 STX8Q9UNK0 236 aa27.36■■□□□ 1.97
CUL4A-209ENST00000488558 CTDP1Q9Y5B0 961 aaPredicted RBP27.35■■□□□ 1.97
CUL4A-209ENST00000488558 TACC3Q9Y6A5 838 aa27.35■■□□□ 1.97
CUL4A-209ENST00000488558 DNM1LO00429 736 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 RANBP6O60518 1105 aaKnown RBP27.34■■□□□ 1.97
CUL4A-209ENST00000488558 PLA2G6O60733 806 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 PCP11498 1178 aaKnown RBP27.34■■□□□ 1.97
CUL4A-209ENST00000488558 STAT2P52630 851 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 FAM160B2Q86V87 743 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 C7orf61Q8IZ16 206 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 INCENPQ9NQS7 918 aa27.34■■□□□ 1.97
CUL4A-209ENST00000488558 PGK2P07205 417 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 SLC1A4P43007 532 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 FXR1P51114 621 aaKnown RBP eCLIP27.33■■□□□ 1.97
CUL4A-209ENST00000488558 MSL3Q8N5Y2 521 aaKnown RBP27.33■■□□□ 1.97
CUL4A-209ENST00000488558 CHURC1Q8WUH1 139 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 TINF2Q9BSI4 451 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 RBM27Q9P2N5 1060 aaKnown RBP27.33■■□□□ 1.97
CUL4A-209ENST00000488558 FBXO40Q9UH90 709 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 RIPK3Q9Y572 518 aa27.33■■□□□ 1.97
CUL4A-209ENST00000488558 TRIOBPQ9H2D6 2365 aa27.33■■□□□ 1.96
CUL4A-209ENST00000488558 A0A1W2PPC1 479 aa27.32■■□□□ 1.96
CUL4A-209ENST00000488558 TMEM232C9JQI7 657 aa27.32■■□□□ 1.96
CUL4A-209ENST00000488558 HIP1O00291 1037 aa27.32■■□□□ 1.96
CUL4A-209ENST00000488558 CPXCR1Q8N123 301 aa27.32■■□□□ 1.96
CUL4A-209ENST00000488558 STAG1Q8WVM7 1258 aa27.32■■□□□ 1.96
CUL4A-209ENST00000488558 DNAJC25-GNG10A0A024R161 153 aa27.31■■□□□ 1.96
CUL4A-209ENST00000488558 NMT2O60551 498 aa27.31■■□□□ 1.96
CUL4A-209ENST00000488558 ARRDC4Q8NCT1 418 aa27.31■■□□□ 1.96
CUL4A-209ENST00000488558 CHST13Q8NET6 341 aa27.31■■□□□ 1.96
CUL4A-209ENST00000488558 RAVER2Q9HCJ3 691 aaKnown RBP27.31■■□□□ 1.96
CUL4A-209ENST00000488558 TCP11L1Q9NUJ3 509 aa27.31■■□□□ 1.96
CUL4A-209ENST00000488558 NT5C2P49902 561 aa27.3■■□□□ 1.96
CUL4A-209ENST00000488558 DIAPH3Q9NSV4 1193 aa27.3■■□□□ 1.96
CUL4A-209ENST00000488558 MCCP23508 829 aa27.29■■□□□ 1.96
CUL4A-209ENST00000488558 RCSD1Q6JBY9 416 aa27.29■■□□□ 1.96
CUL4A-209ENST00000488558 ZNF467Q7Z7K2 595 aaPredicted RBP27.29■■□□□ 1.96
CUL4A-209ENST00000488558 DDX11Q96FC9 970 aa27.29■■□□□ 1.96
CUL4A-209ENST00000488558 TOMM22Q9NS69 142 aa27.29■■□□□ 1.96
CUL4A-209ENST00000488558 SYNGAP1Q96PV0 1343 aa27.29■■□□□ 1.96
CUL4A-209ENST00000488558 LRRC26Q2I0M4 334 aa27.28■■□□□ 1.96
CUL4A-209ENST00000488558 PRAMEF19Q5SWL8 479 aa27.28■■□□□ 1.96
CUL4A-209ENST00000488558 AKNAD1Q5T1N1 836 aa27.28■■□□□ 1.96
CUL4A-209ENST00000488558 MAMDC4Q6UXC1 1216 aa27.28■■□□□ 1.96
CUL4A-209ENST00000488558 DCAF4Q8WV16 495 aa27.28■■□□□ 1.96
CUL4A-209ENST00000488558 RNF41Q9H4P4 317 aaPredicted RBP27.28■■□□□ 1.96
CUL4A-209ENST00000488558 ISY1Q9ULR0 285 aaKnown RBP27.28■■□□□ 1.96
CUL4A-209ENST00000488558 RANBP2P49792 3224 aaKnown RBP27.28■■□□□ 1.96
CUL4A-209ENST00000488558 IKQ13123 557 aaPredicted RBP27.27■■□□□ 1.96
CUL4A-209ENST00000488558 GDF15Q99988 308 aa27.27■■□□□ 1.96
CUL4A-209ENST00000488558 SENP6Q9GZR1 1112 aaPredicted RBP27.27■■□□□ 1.96
CUL4A-209ENST00000488558 ZNF536O15090 1300 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 KBTBD13C9JR72 458 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 TOP1P11387 765 aaKnown RBP27.26■■□□□ 1.95
CUL4A-209ENST00000488558 BMP8BP34820 402 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 HAND2P61296 217 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 TKFCQ3LXA3 575 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 RRP12Q5JTH9 1297 aaKnown RBP27.26■■□□□ 1.95
CUL4A-209ENST00000488558 CWC27Q6UX04 472 aaKnown RBP27.26■■□□□ 1.95
CUL4A-209ENST00000488558 MFSD6Q6ZSS7 791 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 ANKRD35Q8N283 1001 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 ZMYND8Q9ULU4 1186 aaPredicted RBP27.26■■□□□ 1.95
CUL4A-209ENST00000488558 CNPY2Q9Y2B0 182 aa27.26■■□□□ 1.95
CUL4A-209ENST00000488558 ZNF865P0CJ78 1059 aaPredicted RBP27.25■■□□□ 1.95
CUL4A-209ENST00000488558 AKR1A1P14550 325 aa27.25■■□□□ 1.95
CUL4A-209ENST00000488558 GJC2Q5T442 439 aaPredicted RBP27.25■■□□□ 1.95
CUL4A-209ENST00000488558 KCTD1Q719H9 257 aa27.25■■□□□ 1.95
CUL4A-209ENST00000488558 TBC1D10CQ8IV04 446 aa27.25■■□□□ 1.95
CUL4A-209ENST00000488558 ACAD9Q9H845 621 aa27.25■■□□□ 1.95
CUL4A-209ENST00000488558 PCDH10Q9P2E7 1040 aa27.25■■□□□ 1.95
CUL4A-209ENST00000488558 RARBP10826 455 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 SLC4A3P48751 1232 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 ANO1Q5XXA6 986 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 TTC14Q96N46 770 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 TMEM47Q9BQJ4 181 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms