RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 TRIB2Q92519 343 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 APBA2Q99767 749 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 UNC93B1Q9H1C4 597 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 PPP4R2Q9NY27 417 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
PFKFB3-213ENST00000487989 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 PARP14Q460N5 1801 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 SLC4A3P48751 1232 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 TRIM32Q13049 653 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 RASGRP2Q7LDG7 609 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 DCAF4Q8WV16 495 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 ZSCAN10Q96SZ4 725 aaPredicted RBP16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 BRCA2P51587 3418 aa16.66■□□□□ 0.26
PFKFB3-213ENST00000487989 PLA2G6O60733 806 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 GJB1P08034 283 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 FDX1P10109 184 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 FCER1AP12319 257 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 ADORA2AP29274 412 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 COPB2P35606 906 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 TRDNQ13061 729 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 CCL14Q16627 93 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 SNRNP48Q6IEG0 339 aaKnown RBP16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 CASC1Q6TDU7 716 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 RAVER2Q9HCJ3 691 aaKnown RBP16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
PFKFB3-213ENST00000487989 ATP2A1O14983 1001 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 HOXC6P09630 235 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 NPLOC4Q8TAT6 608 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 MMP19Q99542 508 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 KAT14Q9H8E8 782 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
PFKFB3-213ENST00000487989 E7EWF7 191 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 COBLO75128 1261 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 CDC45O75419 566 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 PDHBP11177 359 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 GJA8P48165 433 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 OAZ1P54368 228 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 KCTD2Q14681 263 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 SLC5A4Q9NY91 659 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 RIPK3Q9Y572 518 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 TNKSO95271 1327 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 FRMPD2Q68DX3 1309 aaPredicted RBP16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
PFKFB3-213ENST00000487989 COL11A1P12107 1806 aaPredicted RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 SLC16A2P36021 539 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 SNAP25P60880 206 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 MAP3K21Q5TCX8 1036 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 RALYLQ86SE5 291 aaKnown RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 PAK6Q9NQU5 681 aaPredicted RBP16.62■□□□□ 0.25
PFKFB3-213ENST00000487989 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 SGPL1O95470 568 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 PGK2P07205 417 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 SNHG28P0DPA3 235 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 IFIT1BQ5T764 474 aaKnown RBP16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 NCOA7Q8NI08 942 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 AGBL1Q96MI9 1066 aa16.61■□□□□ 0.25
PFKFB3-213ENST00000487989 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 TFRCP02786 760 aaKnown RBP16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 CYP2C19P33261 490 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 OLFML2BQ68BL8 750 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 DDX11Q96FC9 970 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 FBXO40Q9UH90 709 aa16.6■□□□□ 0.25
PFKFB3-213ENST00000487989 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 SLC27A2O14975 620 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 GOLGA8HP0CJ92 632 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms