RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 SLC16A2P36021 539 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 COG2Q14746 738 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 TAF1CQ15572 869 aaPredicted RBP16.34■□□□□ 0.21
NUP188-207ENST00000487952 ME3Q16798 604 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 STAG2Q8N3U4 1231 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 PRPF38AQ8NAV1 312 aaKnown RBP16.34■□□□□ 0.21
NUP188-207ENST00000487952 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
NUP188-207ENST00000487952 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 PPP1R9AQ9ULJ8 1098 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 NID2Q14112 1375 aa16.34■□□□□ 0.21
NUP188-207ENST00000487952 DSG3P32926 999 aa16.33■□□□□ 0.2
NUP188-207ENST00000487952 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.2
NUP188-207ENST00000487952 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
NUP188-207ENST00000487952 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
NUP188-207ENST00000487952 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
NUP188-207ENST00000487952 ZBED4O75132 1171 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 CDKL5O76039 1030 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
NUP188-207ENST00000487952 LARGE1O95461 756 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 FDX1P10109 184 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 CDC27P30260 824 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
NUP188-207ENST00000487952 SCRN1Q12765 414 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 SNX21Q969T3 373 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 ATG4CQ96DT6 458 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 P2RX7Q99572 595 aaKnown RBP16.32■□□□□ 0.2
NUP188-207ENST00000487952 ZFYVE28Q9HCC9 887 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 PRR12Q9ULL5 1215 aa16.32■□□□□ 0.2
NUP188-207ENST00000487952 SPDYE16A6NNV3 312 aaPredicted RBP16.31■□□□□ 0.2
NUP188-207ENST00000487952 CYP2C8P10632 490 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 HERVK_113P62684 666 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 TMX3Q96JJ7 454 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
NUP188-207ENST00000487952 FAM217BQ9NTX9 383 aaPredicted RBP16.31■□□□□ 0.2
NUP188-207ENST00000487952 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
NUP188-207ENST00000487952 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 BECN1Q14457 450 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 MB21D1Q8N884 522 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 RRP36Q96EU6 259 aaKnown RBP16.3■□□□□ 0.2
NUP188-207ENST00000487952 PAGR1Q9BTK6 254 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
NUP188-207ENST00000487952 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 VWA5AO00534 786 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 CA12O43570 354 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 IFNAR1P17181 557 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
NUP188-207ENST00000487952 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
NUP188-207ENST00000487952 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 LBX2Q6XYB7 198 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
NUP188-207ENST00000487952 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
NUP188-207ENST00000487952 SNAP25P60880 206 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 PLS1Q14651 629 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 PIGSQ96S52 555 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
NUP188-207ENST00000487952 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
NUP188-207ENST00000487952 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 ZBTB5O15062 677 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 CYTH3O43739 400 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 TRPA1O75762 1119 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
NUP188-207ENST00000487952 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 TRAF1Q13077 416 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 CRHR2Q13324 411 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 NTRK3Q16288 839 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 PHKBQ93100 1093 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 RNF26Q9BY78 433 aaPredicted RBP16.27■□□□□ 0.2
NUP188-207ENST00000487952 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.2
NUP188-207ENST00000487952 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
NUP188-207ENST00000487952 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
NUP188-207ENST00000487952 TLR2O60603 784 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms