RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 PAGE5Q96GU1 130 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 FAM53CQ9NYF3 392 aa16.92■□□□□ 0.3
HLA-DQB1-209ENST00000487676 EVA1CP58658 441 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 NOP53Q9NZM5 478 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GMNCA6NCL1 334 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 KIF28PB7ZC32 967 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 FOXN1O15353 648 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CTDNEP1O95476 244 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 B4DLN1 442 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 FMNL1O95466 1100 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GNAQP50148 359 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ZNF658Q5TYW1 1059 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SFMBT2Q5VUG0 894 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 DAAM2Q86T65 1068 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 GPIHBP1Q8IV16 184 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CNOT10Q9H9A5 744 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 KCNK3O14649 394 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RAB17Q9H0T7 212 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CTNND1O60716 968 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MB21D1Q8N884 522 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TRMT112Q9UI30 125 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 M0R2C6 588 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 IFNAR1P17181 557 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CYP7A1P22680 504 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 MRPS25P82663 173 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PTPN12Q05209 780 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 CCDC25Q86WR0 208 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
HLA-DQB1-209ENST00000487676 SMIM24O75264 130 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PDE4BQ07343 736 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZNF473Q8WTR7 871 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 OSBP2Q969R2 916 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KIFC2Q96AC6 838 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 BATF3Q9NR55 127 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 HOMER3Q9NSC5 361 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ADD3Q9UEY8 706 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TRAF5O00463 557 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MOCS3O95396 460 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KLHL30Q0D2K2 578 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CALCOCO2Q13137 446 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CETN2P41208 172 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 GUCY1A3Q02108 690 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PTGDRQ13258 359 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ASIC2Q16515 512 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SV2BQ7L1I2 683 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SPDL1Q96EA4 605 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 RAB3IPQ96QF0 476 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 USP32Q8NFA0 1604 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CCDC169A6NNP5 214 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KIF3CO14782 793 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ZPR1O75312 459 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ATP6V1G3Q96LB4 118 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SH3GL3Q99963 347 aa16.89■□□□□ 0.29
HLA-DQB1-209ENST00000487676 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 STARD3NLO95772 234 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NR5A1Q13285 461 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 DDX12PQ92771 950 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NLRC4Q9NPP4 1024 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PPP1R12AO14974 1030 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PEX26Q7Z412 305 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PLAAQ9Y263 795 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PSMD14O00487 310 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 LSP1P33241 339 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 RASSF7Q02833 373 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 EHHADHQ08426 723 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 BIRC3Q13489 604 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 CRYMQ14894 314 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 INTS9Q9NV88 658 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NOVA2Q9UNW9 492 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
HLA-DQB1-209ENST00000487676 KRIT1O00522 736 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 HGSO14964 777 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 MYO1EQ12965 1108 aa16.87■□□□□ 0.29
HLA-DQB1-209ENST00000487676 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms