RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 CHURC1Q8WUH1 139 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 KRT23Q9C075 422 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 CENPFP49454 3210 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 BRCA2P51587 3418 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
RNF220-215ENST00000487332 RAD21O60216 631 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 NMT2O60551 498 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 ZBED4O75132 1171 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 FCER1AP12319 257 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
RNF220-215ENST00000487332 RRP12Q5JTH9 1297 aaKnown RBP12.1□□□□□ -0.47
RNF220-215ENST00000487332 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 MFSD14CQ5VZR4 134 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
RNF220-215ENST00000487332 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
RNF220-215ENST00000487332 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
RNF220-215ENST00000487332 MSCO60682 206 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
RNF220-215ENST00000487332 PLS1Q14651 629 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 CCL14Q16627 93 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
RNF220-215ENST00000487332 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
RNF220-215ENST00000487332 CHST13Q8NET6 341 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 MMP19Q99542 508 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 TMEM47Q9BQJ4 181 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 OGDHLQ9ULD0 1010 aa12.09□□□□□ -0.47
RNF220-215ENST00000487332 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 COBLO75128 1261 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 FARP2O94887 1054 aaPredicted RBP12.08□□□□□ -0.48
RNF220-215ENST00000487332 PDHBP11177 359 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 CYBAP13498 195 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 TRIM32Q13049 653 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 KCTD2Q14681 263 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 ZNF792Q3KQV3 632 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
RNF220-215ENST00000487332 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 DEFB118Q96PH6 123 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
RNF220-215ENST00000487332 FLRT1Q9NZU1 646 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
RNF220-215ENST00000487332 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
RNF220-215ENST00000487332 ZNF536O15090 1300 aa12.08□□□□□ -0.48
RNF220-215ENST00000487332 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 B4E1Z4 1266 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 KDM4AO75164 1064 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
RNF220-215ENST00000487332 CYP21A2P08686 494 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 MCCP23508 829 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 ZNF543Q08ER8 600 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
RNF220-215ENST00000487332 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
RNF220-215ENST00000487332 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 PRR12Q9ULL5 1215 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 TNKSO95271 1327 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
RNF220-215ENST00000487332 PTH1RQ03431 593 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 CCDC96Q2M329 555 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
RNF220-215ENST00000487332 MAMDC4Q6UXC1 1216 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 KCTD1Q719H9 257 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 HTATIP2Q9BUP3 242 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 MAF1Q9H063 256 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 ACAD9Q9H845 621 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
RNF220-215ENST00000487332 RIPK3Q9Y572 518 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 PFASO15067 1338 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
RNF220-215ENST00000487332 SEPT4O43236 478 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 ICAM1P05362 532 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 NEFLP07196 543 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
RNF220-215ENST00000487332 TRDNQ13061 729 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
RNF220-215ENST00000487332 SEC23AQ15436 765 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 ASPRV1Q53RT3 343 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 LHX8Q68G74 356 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 RASGRP2Q7LDG7 609 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
RNF220-215ENST00000487332 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
RNF220-215ENST00000487332 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms