RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FAAP100Q0VG06 881 aa23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 SNRNP48Q6IEG0 339 aaKnown RBP23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 ZSCAN25Q6NSZ9 544 aa23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 ANKRD33Q7Z3H0 272 aa23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 MSL3Q8N5Y2 521 aaKnown RBP23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 STARD7Q9NQZ5 370 aa23.33■■□□□ 1.33
SMPDL3A-202ENST00000487215 CDH23Q9H251 3354 aa23.33■■□□□ 1.32
SMPDL3A-202ENST00000487215 MYH7P12883 1935 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 SNAI1O95863 264 aaPredicted RBP23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 KLHDC9Q8NEP7 349 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 TOX2Q96NM4 488 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 FAM184BQ9ULE4 1060 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 RIPK3Q9Y572 518 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 VCANP13611 3396 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 SYNGAP1Q96PV0 1343 aa23.32■■□□□ 1.32
SMPDL3A-202ENST00000487215 DNAJC25-GNG10A0A024R161 153 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 NDUFB10O96000 172 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 RASA1P20936 1047 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 NUP133Q8WUM0 1156 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 DDX11Q96FC9 970 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 NYAP2Q9P242 653 aa23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 ZHX1Q9UKY1 873 aaPredicted RBP23.31■■□□□ 1.32
SMPDL3A-202ENST00000487215 MYADML2A6NDP7 307 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 DCDC2CA8MYV0 355 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 F5H6K3 240 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 KLRC3Q07444 240 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 SBK1Q52WX2 424 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 MAMDC4Q6UXC1 1216 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 STK11IPQ8N1F8 1099 aa23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 STRBPQ96SI9 672 aaKnown RBP23.3■■□□□ 1.32
SMPDL3A-202ENST00000487215 KCNA10Q16322 511 aa23.29■■□□□ 1.32
SMPDL3A-202ENST00000487215 PRPF38AQ8NAV1 312 aaKnown RBP23.29■■□□□ 1.32
SMPDL3A-202ENST00000487215 TBX21Q9UL17 535 aa23.29■■□□□ 1.32
SMPDL3A-202ENST00000487215 SPTBN5Q9NRC6 3674 aaKnown RBP23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 ATP2A1O14983 1001 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 DUSP11O75319 330 aaKnown RBP23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 DNAJB2P25686 324 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 SLC4A3P48751 1232 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 IRX5P78411 483 aaPredicted RBP23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 ZNF467Q7Z7K2 595 aaPredicted RBP23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 CPXCR1Q8N123 301 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 MKNK2Q9HBH9 465 aa23.28■■□□□ 1.32
SMPDL3A-202ENST00000487215 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 GSG1L2A8MUP6 293 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 MINDY4BA8MYZ0 360 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 SMARCA5O60264 1052 aaPredicted RBP23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 TIMP1P01033 207 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 CST5P28325 142 aaPredicted RBP23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 GRIN2CQ14957 1233 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 GIMAP6Q6P9H5 292 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 MIER1Q8N108 512 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 PRUNE2Q8WUY3 3088 aa23.27■■□□□ 1.32
SMPDL3A-202ENST00000487215 IGKV6D-41A0A0C4DH26 115 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 ADCY6O43306 1168 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 ZBED4O75132 1171 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 ACVR2BQ13705 512 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 KIFC2Q96AC6 838 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 FGD4Q96M96 766 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 GLT1D1Q96MS3 346 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 RAVER2Q9HCJ3 691 aaKnown RBP23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 ELP1O95163 1332 aa23.26■■□□□ 1.31
SMPDL3A-202ENST00000487215 C6orf222P0C671 652 aaPredicted RBP23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 OSBP2Q969R2 916 aa23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 CHMP4BQ9H444 224 aaKnown RBP23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 SLC38A10Q9HBR0 1119 aa23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 ECHDC1Q9NTX5 307 aa23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 CTDP1Q9Y5B0 961 aaPredicted RBP23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 MROH7Q68CQ1 1323 aa23.25■■□□□ 1.31
SMPDL3A-202ENST00000487215 ASGR1P07306 291 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 CDK7P50613 346 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 ANKRD35Q8N283 1001 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 KBTBD3Q8NAB2 608 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 PCSK9Q8NBP7 692 aaKnown RBP23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 APPBP2Q92624 585 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 UPF3AQ9H1J1 476 aaKnown RBP23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 ABHD16BQ9H3Z7 469 aa23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 EPB41L4AQ9HCS5 686 aaPredicted RBP23.24■■□□□ 1.31
SMPDL3A-202ENST00000487215 CCDC144BQ3MJ40 725 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 USP38Q8NB14 1042 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 MKL1Q969V6 931 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 TIFAQ96CG3 184 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 CEP95Q96GE4 821 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 ZNF576Q9H609 170 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 SPC25Q9HBM1 224 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 FBXO40Q9UH90 709 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 FEM1BQ9UK73 627 aa23.23■■□□□ 1.31
SMPDL3A-202ENST00000487215 PRDM1O75626 825 aa23.22■■□□□ 1.31
SMPDL3A-202ENST00000487215 GJA9P57773 515 aa23.22■■□□□ 1.31
SMPDL3A-202ENST00000487215 PPIGQ13427 754 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMPDL3A-202ENST00000487215 C16orf59Q7L2K0 433 aa23.22■■□□□ 1.31
SMPDL3A-202ENST00000487215 ARMCX2Q7L311 632 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms