RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 EZH2Q15910 746 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 PRRT3Q5FWE3 981 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 WIPI1Q5MNZ9 446 aaPredicted RBP8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 ACAD11Q709F0 780 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 TCP11L2Q8N4U5 519 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 NBPF4Q96M43 638 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 SPON1Q9HCB6 807 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 NOP53Q9NZM5 478 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 USP54Q70EL1 1684 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 LMO7Q8WWI1 1683 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
RTFDC1-209ENST00000487211 AOC2O75106 756 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 WISP1O95388 367 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 SLFN14P0C7P3 912 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 MTHFSP49914 203 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 INPP5AQ14642 412 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 BEND7Q8N7W2 519 aaPredicted RBP8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 CPLX3Q8WVH0 158 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 ELMO3Q96BJ8 720 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 PLPPR2Q96GM1 343 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
RTFDC1-209ENST00000487211 INSRP06213 1382 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 PLCH1Q4KWH8 1693 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 DCDC2CA8MYV0 355 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 ELNP15502 786 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 SELPP16109 830 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 ZNF165P49910 485 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 EIF4A2Q14240 407 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 IGF2-ASQ6U949 168 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 GK5Q6ZS86 529 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 HDXQ7Z353 690 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 ADAMTS8Q9UP79 889 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 THRAP3Q9Y2W1 955 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 CSADQ9Y600 493 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 SNCAIPQ9Y6H5 919 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 CRB1P82279 1406 aa8.25□□□□□ -1.09
RTFDC1-209ENST00000487211 FLT4P35916 1363 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 NWD2Q9ULI1 1742 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 GRIN3BO60391 1043 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 PPP2R1AP30153 589 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 AKAP4Q5JQC9 854 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 CCDC81Q6ZN84 652 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 USHBP1Q8N6Y0 703 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 FERD3LQ96RJ6 166 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 STRIP2Q9ULQ0 834 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 PPT2Q9UMR5 302 aa8.24□□□□□ -1.09
RTFDC1-209ENST00000487211 RTL1A6NKG5 1358 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 KIF24Q5T7B8 1368 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 RGPD5Q99666 1765 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 GFRA2O00451 464 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 STK10O94804 968 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 IL13P35225 146 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 INSM1Q01101 510 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 CLCQ05315 142 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 GRIK4Q16099 956 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 C12orf40Q86WS4 652 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 CAMKK2Q96RR4 588 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 TMPRSS13Q9BYE2 586 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 RNF208Q9H0X6 261 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 POLR3KQ9Y2Y1 108 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 PCDHB14Q9Y5E9 798 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 KIF20BQ96Q89 1820 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
RTFDC1-209ENST00000487211 MAP2P11137 1827 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 ATP10DQ9P241 1426 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 PRAMEF27A3QJZ7 478 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 MEGF11A6BM72 1044 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 ID3Q02535 119 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 ZC3H12AQ5D1E8 599 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 KRT27Q7Z3Y8 459 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 REXO1Q8N1G1 1221 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 CYP4F12Q9HCS2 524 aa8.22□□□□□ -1.09
RTFDC1-209ENST00000487211 LTN1O94822 1766 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 EXOC5O00471 708 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 IL2RBP14784 551 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 HTRA3P83110 453 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 RALBP1Q15311 655 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 CRBNQ96SW2 442 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 SYT17Q9BSW7 474 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 PICK1Q9NRD5 415 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 PPP1R9AQ9ULJ8 1098 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms