RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 ZNF541Q9H0D2 1346 aa10.99□□□□□ -0.65
POLR1A-208ENST00000486964 PCNTO95613 3336 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 CYTH3O43739 400 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 MYO1BO43795 1136 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 TTLL1O95922 423 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 TNNT1P13805 278 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 HSPA6P17066 643 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 KCNJ6P48051 423 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 ME1P48163 572 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
POLR1A-208ENST00000486964 NPY5RQ15761 445 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 TPD52L1Q16890 204 aaPredicted RBP10.98□□□□□ -0.65
POLR1A-208ENST00000486964 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
POLR1A-208ENST00000486964 FSIP1Q8NA03 581 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 POLR3EQ9NVU0 708 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 SIPA1L1O43166 1804 aa10.98□□□□□ -0.65
POLR1A-208ENST00000486964 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 CCP110O43303 1012 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 MMP1P03956 469 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 PFKFB3Q16875 520 aaPredicted RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 TMEM179Q6ZVK1 233 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 GPC2Q8N158 579 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 CCDC82Q8N4S0 544 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 ENGASEQ8NFI3 743 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 GTPBP4Q9BZE4 634 aaKnown RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 RIOX1Q9H6W3 641 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
POLR1A-208ENST00000486964 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 TCHHQ07283 1943 aa10.97□□□□□ -0.65
POLR1A-208ENST00000486964 FAM196BA6NMK8 535 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 USP17L5A8MUK1 530 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 PDHBP11177 359 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
POLR1A-208ENST00000486964 FOSBP53539 338 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.65
POLR1A-208ENST00000486964 MYSM1Q5VVJ2 828 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 SAMD7Q7Z3H4 446 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 LRRC8AQ8IWT6 810 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 JMYQ8N9B5 988 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 TNFRSF25Q93038 417 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 USP28Q96RU2 1077 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 TMEM39BQ9GZU3 492 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.65
POLR1A-208ENST00000486964 SH3GLB2Q9NR46 395 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 GPRC5DQ9NZD1 345 aa10.96□□□□□ -0.65
POLR1A-208ENST00000486964 GREB1LQ9C091 1923 aaPredicted RBP10.96□□□□□ -0.66
POLR1A-208ENST00000486964 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 KLRF2D3W0D1 207 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 PARP1P09874 1014 aaKnown RBP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 SCG2P13521 617 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 RASA3Q14644 834 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 SEPT2Q15019 361 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 STK38Q15208 465 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 ABCB5Q2M3G0 1257 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 CEP135Q66GS9 1140 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 FMR1NBQ8N0W7 255 aaPredicted RBP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 MTMR8Q96EF0 704 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 C16orf45Q96MC5 204 aaPredicted RBP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.95□□□□□ -0.66
POLR1A-208ENST00000486964 GJA3Q9Y6H8 435 aa10.95□□□□□ -0.66
POLR1A-208ENST00000486964 BTBD18B2RXH4 712 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 H7C1D1 291 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 AKAP17AQ02040 695 aaKnown RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 TRIM29Q14134 588 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 PTPN14Q15678 1187 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 ASPRV1Q53RT3 343 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 C11orf57Q6ZUT1 292 aaPredicted RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 CLEC10AQ8IUN9 316 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 LINC00301Q8NCQ3 95 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 CACTINQ8WUQ7 758 aaKnown RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 TIGD1Q96MW7 591 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 SDF4Q9BRK5 362 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 GOLPH3LQ9H4A5 285 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 VEZTQ9HBM0 779 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 KCNJ14Q9UNX9 436 aa10.94□□□□□ -0.66
POLR1A-208ENST00000486964 MORC2Q9Y6X9 1032 aaPredicted RBP10.94□□□□□ -0.66
POLR1A-208ENST00000486964 ASTN2O75129 1339 aaPredicted RBP10.93□□□□□ -0.66
POLR1A-208ENST00000486964 hCG_1642624A0A1W2PR95 340 aa10.93□□□□□ -0.66
POLR1A-208ENST00000486964 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms