RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 XDHP47989 1333 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 KIF13AQ9H1H9 1805 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
CCDC171-208ENST00000486641 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
CCDC171-208ENST00000486641 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-208ENST00000486641 PARP1P09874 1014 aaKnown RBP11.89□□□□□ -0.51
CCDC171-208ENST00000486641 MEA1Q16626 185 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 ZNF572Q7Z3I7 529 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-208ENST00000486641 IQCKQ8N0W5 287 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 STIM2Q9P246 746 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
CCDC171-208ENST00000486641 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 TMCO5BA8MYB1 307 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 NEBLO76041 1014 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 CYLC1P35663 651 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 LIFRP42702 1097 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 MRPL12P52815 198 aaKnown RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 ITIH3Q06033 890 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 EARS2Q5JPH6 523 aaKnown RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC43Q96MW1 224 aaKnown RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 WNT7AO00755 349 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 FAM153BP0C7A2 387 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 NR1D1P20393 614 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 CXCR5P32302 372 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 MDH1P40925 334 aaKnown RBP11.88□□□□□ -0.51
CCDC171-208ENST00000486641 CDR1P51861 262 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 SNCBQ16143 134 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 FAM153CQ494X1 144 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC114Q96M63 670 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 MTRQ99707 1265 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 FAM153AQ9UHL3 310 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
CCDC171-208ENST00000486641 NFAT5O94916 1531 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 TNRQ92752 1358 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 A0A1W2PQC6 194 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 LGALS16A8MUM7 142 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 E7EVH7 732 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CIAO1O76071 339 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 FAM107AO95990 144 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC171-208ENST00000486641 PRCPP42785 496 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CFAP58Q5T655 872 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 FUKQ8N0W3 1084 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-208ENST00000486641 PIK3R5Q8WYR1 880 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 PSMB7Q99436 277 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 LRWD1Q9UFC0 647 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-208ENST00000486641 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 H7C1D1 291 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 ZNF263O14978 683 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 DEXIO95424 95 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 TNFRSF8P28908 595 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CRYMQ14894 314 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 SPRED3Q2MJR0 410 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 ZNF658Q5TYW1 1059 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-208ENST00000486641 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 CYB5D1Q6P9G0 228 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 OSBPL9Q96SU4 736 aa11.87□□□□□ -0.51
CCDC171-208ENST00000486641 DNM1LO00429 736 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 PRLRP16471 622 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 ADD2P35612 726 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 CARSP49589 748 aaKnown RBP11.86□□□□□ -0.51
CCDC171-208ENST00000486641 KLK7P49862 253 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 VAV2P52735 878 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 CTDSPL2Q05D32 466 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 DRP2Q13474 957 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 RTN1Q16799 776 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 KRT26Q7Z3Y9 468 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 TRIM58Q8NG06 486 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 NFU1Q9UMS0 254 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 LAMB4A4D0S4 1761 aa11.86□□□□□ -0.51
CCDC171-208ENST00000486641 FRMD3A2A2Y4 597 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms