RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 HOXB7P09629 217 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 BMP4P12644 408 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 CASP7P55210 303 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
USP41-204ENST00000486536 ZNF252P-AS1Q0IIN9 211 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 IKBKEQ14164 716 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 LARP1BQ659C4 914 aaKnown RBP7.52□□□□□ -1.21
USP41-204ENST00000486536 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 C8orf58Q8NAV2 365 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 GAL3ST3Q96A11 431 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 SENP2Q9HC62 589 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 FANCLQ9NW38 375 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 SLC6A14Q9UN76 642 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 TRIM33Q9UPN9 1127 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 LRRC37A3O60309 1634 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 SPATA31A5Q5VU36 1347 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 SPATA31A7Q8IWB4 1347 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 ERVV-2B6SEH9 535 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 IPO8O15397 1037 aaKnown RBP7.51□□□□□ -1.21
USP41-204ENST00000486536 CDC45O75419 566 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 TRIM37O94972 964 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 ATE1O95260 518 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 RASGRF1Q13972 1273 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 VPS72Q15906 364 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 PPP2R5EQ16537 467 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 LSRQ86X29 649 aaPredicted RBP7.51□□□□□ -1.21
USP41-204ENST00000486536 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 TSPYL6Q8N831 410 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 MICAL1Q8TDZ2 1067 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 SSH1Q8WYL5 1049 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 ARHGAP45Q92619 1136 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 APPBP2Q92624 585 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 KIFC2Q96AC6 838 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 SLC52A2Q9HAB3 445 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 MAPK8IP1Q9UQF2 711 aa7.51□□□□□ -1.21
USP41-204ENST00000486536 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
USP41-204ENST00000486536 EXOC5O00471 708 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 SOX1O00570 391 aaPredicted RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 PPP1R12AO14974 1030 aaPredicted RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 PLIN1O60240 522 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 GRIN3BO60391 1043 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 CDC27P30260 824 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 EIF4A1P60842 406 aaKnown RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 ZKSCAN2Q63HK3 967 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 MAP1SQ66K74 1059 aaPredicted RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 PDZD3Q86UT5 571 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 TNFRSF25Q93038 417 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 BRINP2Q9C0B6 783 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 MIS18AQ9NYP9 233 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
USP41-204ENST00000486536 ATRNO75882 1429 aa7.5□□□□□ -1.21
USP41-204ENST00000486536 MRC1P22897 1456 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 BCL9LQ86UU0 1499 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ADAMTS7Q9UKP4 1686 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ESYT3A0FGR9 886 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 CDC14CA4D256 554 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ELL2O00472 640 aaPredicted RBP7.49□□□□□ -1.21
USP41-204ENST00000486536 DNAJC6O75061 913 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 GJB6O95452 261 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ADH7P40394 386 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 CABP4P57796 275 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ANAPC15P60006 121 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
USP41-204ENST00000486536 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 CCDC30Q5VVM6 783 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 ATF7IPQ6VMQ6 1270 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.49□□□□□ -1.21
USP41-204ENST00000486536 RUFY4Q6ZNE9 571 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 HOMER1Q86YM7 354 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 SLKQ9H2G2 1235 aaPredicted RBP7.49□□□□□ -1.21
USP41-204ENST00000486536 SPC25Q9HBM1 224 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
USP41-204ENST00000486536 FRRS1LQ9P0K9 344 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 KLF15Q9UIH9 416 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 PKD1L3Q7Z443 1732 aa7.49□□□□□ -1.21
USP41-204ENST00000486536 HEG1Q9ULI3 1381 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 DDAH1O94760 285 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 GSTP1P09211 210 aaKnown RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 DDB1Q16531 1140 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 TNS2Q63HR2 1409 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 GDF6Q6KF10 455 aaPredicted RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 ZNF790Q6PG37 636 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 DZIP1LQ8IYY4 767 aaKnown RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 TTC9Q92623 222 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 FRAT1Q92837 279 aaPredicted RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 STK31Q9BXU1 1019 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 API5Q9BZZ5 524 aaKnown RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 ANTXR1Q9H6X2 564 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 PARP4Q9UKK3 1724 aaKnown RBP7.48□□□□□ -1.21
USP41-204ENST00000486536 NWD2Q9ULI1 1742 aa7.48□□□□□ -1.21
USP41-204ENST00000486536 NOB1Q9ULX3 412 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms