RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 FLT3LGP49771 235 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 MTFR1Q15390 333 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 LRRFIP1Q32MZ4 808 aaKnown RBP10.47□□□□□ -0.73
COL12A1-208ENST00000486533 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 CREB3L3Q68CJ9 461 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 CCDC83Q8IWF9 413 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 MAP4K1Q92918 833 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 COA7Q96BR5 231 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 PRIMPOLQ96LW4 560 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 FEZ1Q99689 392 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL12A1-208ENST00000486533 EHD4Q9H223 541 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 DDX19AQ9NUU7 478 aaKnown RBP10.47□□□□□ -0.73
COL12A1-208ENST00000486533 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
COL12A1-208ENST00000486533 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
COL12A1-208ENST00000486533 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.73
COL12A1-208ENST00000486533 C19orf81C9J6K1 198 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 ADCY3O60266 1144 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 HMGB1P09429 215 aaKnown RBP10.46□□□□□ -0.74
COL12A1-208ENST00000486533 PLCD1P51178 756 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 UBXN2AP68543 259 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 ZYXQ15942 572 aaKnown RBP10.46□□□□□ -0.74
COL12A1-208ENST00000486533 CERKLQ49MI3 558 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-208ENST00000486533 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 LCORLQ8N3X6 602 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 RNF214Q8ND24 703 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 SDR42E1Q8WUS8 393 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 HAUS7Q99871 368 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 MYH7P12883 1935 aa10.46□□□□□ -0.74
COL12A1-208ENST00000486533 CEP290O15078 2479 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 VPS37CA5D8V6 355 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-208ENST00000486533 FIBPO43427 364 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 MBD4O95243 580 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 CCL5P13501 91 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 ELNP15502 786 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 ABCB5Q2M3G0 1257 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 LARP1BQ659C4 914 aaKnown RBP10.45□□□□□ -0.74
COL12A1-208ENST00000486533 RNF208Q9H0X6 261 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 ARMT1Q9H993 441 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 CABP5Q9NP86 173 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 MTMR6Q9Y217 621 aa10.45□□□□□ -0.74
COL12A1-208ENST00000486533 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 SLC27A2O14975 620 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 GADD45BO75293 160 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 HOXA7P31268 230 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 SHMT1P34896 483 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 ADD2P35612 726 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 SLFNL1Q499Z3 407 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 ZSCAN16Q9H4T2 348 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 DCP1AQ9NPI6 582 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 MYH8P13535 1937 aa10.44□□□□□ -0.74
COL12A1-208ENST00000486533 BAZ2AQ9UIF9 1905 aaKnown RBP10.44□□□□□ -0.74
COL12A1-208ENST00000486533 KDM4AO75164 1064 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 INHAP05111 366 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 HERVK_113P62684 666 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 IRF5Q13568 498 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 DNTTIP2Q5QJE6 756 aaKnown RBP10.43□□□□□ -0.74
COL12A1-208ENST00000486533 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 CCAR1Q8IX12 1150 aaKnown RBP10.43□□□□□ -0.74
COL12A1-208ENST00000486533 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PAGR1Q9BTK6 254 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 UNC93B1Q9H1C4 597 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 EMILIN3Q9NT22 766 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 UQCRHLA0A096LP55 91 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PRKAB2O43741 272 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PEX10O60683 326 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 ADCY5O95622 1261 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 CHGBP05060 677 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 UQCRHP07919 91 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 GJB1P08034 283 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 CYP2D6P10635 497 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 USP14P54578 494 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PTH1RQ03431 593 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 ZSCAN25Q6NSZ9 544 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 GPRC5AQ8NFJ5 357 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 PXYLP1Q8TE99 480 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 KHSRPQ92945 711 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL12A1-208ENST00000486533 SHISA4Q96DD7 197 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 IL25Q9H293 177 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 ATP8A2Q9NTI2 1148 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 MORF4L1Q9UBU8 362 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
COL12A1-208ENST00000486533 CTAGE5O15320 804 aa10.42□□□□□ -0.74
COL12A1-208ENST00000486533 SLC34A2O95436 690 aa10.42□□□□□ -0.74
COL12A1-208ENST00000486533 GJA8P48165 433 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms