RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 AKR1A1P14550 325 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 RAG1P15918 1043 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 KCTD2Q14681 263 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 RPAP2Q8IXW5 612 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
SDCCAG3-211ENST00000486441 MYH8P13535 1937 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 FOSL2P15408 326 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 RASA1P20936 1047 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 KCNA10Q16322 511 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 PRDM6Q9NQX0 595 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 REV3LO60673 3130 aa17.17■□□□□ 0.34
SDCCAG3-211ENST00000486441 CTAGE5O15320 804 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 TIMP1P01033 207 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 FPGSQ05932 587 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 KATNBL1Q9H079 304 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 SYNGAP1Q96PV0 1343 aa17.16■□□□□ 0.34
SDCCAG3-211ENST00000486441 IGKV6D-41A0A0C4DH26 115 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 GSG1L2A8MUP6 293 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 F5H6K3 240 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 ATP2A1O14983 1001 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 DNAJB2P25686 324 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 KLRC3Q07444 240 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 STRBPQ96SI9 672 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 STARD7Q9NQZ5 370 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 NYAP2Q9P242 653 aa17.15■□□□□ 0.34
SDCCAG3-211ENST00000486441 MOXD2PA6NHM9 499 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 GRXCR1A8MXD5 290 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 DUSP11O75319 330 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 NDUFB10O96000 172 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 CST5P28325 142 aaPredicted RBP17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 PBX2P40425 430 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 TMEM240Q5SV17 173 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 SNRNP48Q6IEG0 339 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 MFSD5Q6N075 450 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 TEX13BQ9BXU2 312 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 XIRP2A4UGR9 3374 aa17.14■□□□□ 0.33
SDCCAG3-211ENST00000486441 COPB2P35606 906 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 NKX3-2P78367 333 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 MKL1Q969V6 931 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 ZNF576Q9H609 170 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 ELP1O95163 1332 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 MCM3APO60318 1980 aa17.13■□□□□ 0.33
SDCCAG3-211ENST00000486441 TRANK1O15050 2925 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 ASGR1P07306 291 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 GJA9P57773 515 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
SDCCAG3-211ENST00000486441 CCDC144BQ3MJ40 725 aa17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 ZHX1Q9UKY1 873 aaPredicted RBP17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SDCCAG3-211ENST00000486441 ARVCFO00192 962 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 RAD21O60216 631 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 HMMRO75330 724 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 CD4P01730 458 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 CSF2RAP15509 400 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 ADGRE1Q14246 886 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 ABHD16BQ9H3Z7 469 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
SDCCAG3-211ENST00000486441 MYH7P12883 1935 aa17.09■□□□□ 0.33
SDCCAG3-211ENST00000486441 ACRP10323 421 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms