RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 CDHR2Q9BYE9 1310 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 PSMD14O00487 310 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 KIF23Q02241 960 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 AIMP1Q12904 312 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 GRAPQ13588 217 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 NFE2L2Q16236 605 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 RGMBQ6NW40 437 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 LRP10Q7Z4F1 713 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 NLRP10Q86W26 655 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 GRAPLQ8TC17 118 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 DBNDD1Q9H9R9 158 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 GBA2Q9HCG7 927 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 TSPYL4Q9UJ04 414 aa8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-209ENST00000486235 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 TRPA1O75762 1119 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 WISP1O95388 367 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 MED26O95402 600 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 ATP11AP98196 1134 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 COPS6Q7L5N1 327 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 C2orf69Q8N8R5 385 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 PLEKHF1Q96S99 279 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
TMEM39A-209ENST00000486235 DUOX1Q9NRD9 1551 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 SH3TC1Q8TE82 1336 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 A6NJR5 290 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 SOX18P35713 384 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 HSP90AB3PQ58FF7 597 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 CAPN12Q6ZSI9 719 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 MAP4K3Q8IVH8 894 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 DPF2Q92785 391 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 CELF1Q92879 486 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 DCPSQ96C86 337 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 MKNK1Q9BUB5 465 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 SRA1Q9HD15 236 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 KCNK4Q9NYG8 393 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 STOML1Q9UBI4 398 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
TMEM39A-209ENST00000486235 ASTN2O75129 1339 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 TGFB1P01137 390 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 CD97P48960 835 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 GPSM2P81274 684 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 TCIRG1Q13488 830 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 KIF4BQ2VIQ3 1234 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 CEP135Q66GS9 1140 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 Q6ZS46 218 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 SAGE1Q9NXZ1 904 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 GGA3Q9NZ52 723 aa8.4□□□□□ -1.06
TMEM39A-209ENST00000486235 LAMB2P55268 1798 aa8.4□□□□□ -1.07
TMEM39A-209ENST00000486235 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 TAF1P21675 1872 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 ECE2O60344 883 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 C16orf46Q6P387 395 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 ACAD11Q709F0 780 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 CTU1Q7Z7A3 348 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 CDCA5Q96FF9 252 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 CSRNP1Q96S65 589 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 MUC3BQ9H195 1237 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 POLLQ9UGP5 575 aa8.39□□□□□ -1.07
TMEM39A-209ENST00000486235 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 CD68P34810 354 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 SCNN1AP37088 669 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 RIPK4P57078 832 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 HYAL2Q12891 473 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 ADAMTSL4Q6UY14 1074 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 RASAL3Q86YV0 1011 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 OR13H1Q8NG92 308 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 EYA3Q99504 573 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 ANKRD36CQ5JPF3 1778 aa8.38□□□□□ -1.07
TMEM39A-209ENST00000486235 COL4A1P02462 1669 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 DHX15O43143 795 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 CDC27P30260 824 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 ANGEL2Q5VTE6 544 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms