RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-208	ENST00000486159	LPAR1	Q92633	364 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	LENG1	Q96BZ8	264 aa	Predicted RBP	11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	MAML3	Q96JK9	1138 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	C22orf23	Q9BZE7	217 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	INCENP	Q9NQS7	918 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	PRDM6	Q9NQX0	595 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	ADAMTS5	Q9UNA0	930 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	RIPK3	Q9Y572	518 aa		11.16	□□□□□ -0.62
TMEM39A-208	ENST00000486159	TTC41P	Q6P2S7	1318 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	ZNF236	Q9UL36	1845 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	WDR46	O15213	610 aa	Known RBP	11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	GSPT1	P15170	499 aa	Known RBP	11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	COL9A1	P20849	921 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	SLC4A3	P48751	1232 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	IRX5	P78411	483 aa	Predicted RBP	11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	SHCBP1	Q8NEM2	672 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	IL27	Q8NEV9	243 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	FERMT2	Q96AC1	680 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	CCDC17	Q96LX7	622 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	UBE2O	Q9C0C9	1292 aa	Known RBP	11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	KANSL2	Q9H9L4	492 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	TACC3	Q9Y6A5	838 aa		11.15	□□□□□ -0.62
TMEM39A-208	ENST00000486159	PLXNA1	Q9UIW2	1896 aa		11.15	□□□□□ -0.63
TMEM39A-208	ENST00000486159		A0A1W2PPC1	479 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	VWA5A	O00534	786 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ERC2	O15083	957 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	RNF113A	O15541	343 aa	Known RBP	11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	GPAA1	O43292	621 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	EPB41L2	O43491	1005 aa	Known RBP	11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	STRN	O43815	780 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MFAP1	P55081	439 aa	Known RBP	11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	RTP1	P59025	263 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	FAM47A	Q5JRC9	791 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	OLFML2B	Q68BL8	750 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	CCDC129	Q6ZRS4	1044 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SH3RF1	Q7Z6J0	888 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	TDH	Q8IZJ6	230 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PI4K2B	Q8TCG2	481 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	APPBP2	Q92624	585 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	GPATCH3	Q96I76	525 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MMP19	Q99542	508 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	CLIP2	Q9UDT6	1046 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ZNF214	Q9UL59	606 aa	Predicted RBP	11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PPP1R9A	Q9ULJ8	1098 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ATP11B	Q9Y2G3	1177 aa		11.14	□□□□□ -0.63
TMEM39A-208	ENST00000486159	IGKV6D-41	A0A0C4DH26	115 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159		F5H6K3	240 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	DNM1L	O00429	736 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	FOXP2	O15409	715 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SEPT4	O43236	478 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	REC8	O95072	547 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	NDUFB10	O96000	172 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SDS	P20132	328 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	STAT3	P40763	770 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ADCYAP1R1	P41586	468 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	KLRC3	Q07444	240 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ZNF792	Q3KQV3	632 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SBK1	Q52WX2	424 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ZSCAN25	Q6NSZ9	544 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SLC39A5	Q6ZMH5	540 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	RASGRP2	Q7LDG7	609 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	RIOX2	Q8IUF8	465 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	LRRC47	Q8N1G4	583 aa	Known RBP	11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MROH8	Q9H579	483 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MKNK2	Q9HBH9	465 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MYH4	Q9Y623	1939 aa		11.13	□□□□□ -0.63
TMEM39A-208	ENST00000486159	LTBP2	Q14767	1821 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PGK1	P00558	417 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	APP	P05067	770 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	FCER1A	P12319	257 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ITGB8	P26012	769 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	LRRC41	Q15345	812 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	TRIM60	Q495X7	471 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	AMOTL1	Q8IY63	956 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	IFNL3	Q8IZI9	196 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	CPXCR1	Q8N123	301 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	DEFB123	Q8N688	67 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	MB21D1	Q8N884	522 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	CEP95	Q96GE4	821 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	RAVER2	Q9HCJ3	691 aa	Known RBP	11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	GOPC	Q9HD26	462 aa		11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	DDX49	Q9Y6V7	483 aa	Known RBP	11.12	□□□□□ -0.63
TMEM39A-208	ENST00000486159	TRIM43B	A6NCK2	446 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PATL2	C9JE40	543 aa	Known RBP	11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SNAI1	O95863	264 aa	Predicted RBP	11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PTGS1	P23219	599 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	TDO2	P48775	406 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SNAP25	P60880	206 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	LRIT3	Q3SXY7	679 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	C9orf50	Q5SZB4	431 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ABRA	Q8N0Z2	381 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	FAM161B	Q96MY7	647 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	SH2D4A	Q9H788	454 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	NYAP2	Q9P242	653 aa		11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	LAMA2	P24043	3122 aa	Known RBP	11.11	□□□□□ -0.63
TMEM39A-208	ENST00000486159	ROBO3	Q96MS0	1386 aa		11.11	□□□□□ -0.63

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