RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KLRC3Q07444 240 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 PPARAQ07869 468 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 SPATC1LQ9H0A9 340 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 CRISPLD2Q9H0B8 497 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 PORCNQ9H237 461 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 MROH8Q9H579 483 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS50-218ENST00000485994 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
VPS50-218ENST00000485994 ATP2A1O14983 1001 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 INHAP05111 366 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 ELNP15502 786 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 COPB2P35606 906 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 GRB14Q14449 540 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 B4GALNT3Q6L9W6 998 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS50-218ENST00000485994 CCAR1Q8IX12 1150 aaKnown RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 ANKLE1Q8NAG6 615 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 PRPF38AQ8NAV1 312 aaKnown RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 U2AF1L4Q8WU68 220 aaKnown RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 PAGR1Q9BTK6 254 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 MOV10L1Q9BXT6 1211 aaKnown RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 MFRPQ9BY79 579 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
VPS50-218ENST00000485994 HCSTQ9UBK5 93 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 CLIP2Q9UDT6 1046 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 PPP1R9AQ9ULJ8 1098 aa8.32□□□□□ -1.08
VPS50-218ENST00000485994 SMCHD1A6NHR9 2005 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 VWA5AO00534 786 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 PEX10O60683 326 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 FLOT1O75955 427 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
VPS50-218ENST00000485994 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 CYP2B6P20813 491 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 PBX2P40425 430 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 PSEN2P49810 448 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TFAP4Q01664 338 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
VPS50-218ENST00000485994 VPS53Q5VIR6 699 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 OLFML2BQ68BL8 750 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 SPICE1Q8N0Z3 855 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 REPS2Q8NFH8 660 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TRIB2Q92519 343 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 RILPL2Q969X0 211 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 SHISA4Q96DD7 197 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 FAM227BQ96M60 508 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TTC14Q96N46 770 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 APBA2Q99767 749 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 SLC5A4Q9NY91 659 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 FEM1BQ9UK73 627 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 DIS3Q9Y2L1 958 aaKnown RBP8.31□□□□□ -1.08
VPS50-218ENST00000485994 IVNS1ABPQ9Y6Y0 642 aa8.31□□□□□ -1.08
VPS50-218ENST00000485994 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 A0A0D9SFI3 127 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 PRDM1O75626 825 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 NDUFB10O96000 172 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 TFRCP02786 760 aaKnown RBP8.3□□□□□ -1.08
VPS50-218ENST00000485994 ERCC3P19447 782 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 STAT3P40763 770 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 OAZ1P54368 228 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 ATP2B2Q01814 1243 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 CACNB2Q08289 660 aaPredicted RBP8.3□□□□□ -1.08
VPS50-218ENST00000485994 TMEM132BQ14DG7 1078 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 FAM83BQ5T0W9 1011 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 RCSD1Q6JBY9 416 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 CCDC129Q6ZRS4 1044 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 CLEC10AQ8IUN9 316 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS50-218ENST00000485994 IL17RBQ9NRM6 502 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 ZNF214Q9UL59 606 aaPredicted RBP8.3□□□□□ -1.08
VPS50-218ENST00000485994 OGDHLQ9ULD0 1010 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
VPS50-218ENST00000485994 A0A0G2JMZ2 1700 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
VPS50-218ENST00000485994 MSCO60682 206 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 FCER1AP12319 257 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 ZKSCAN1P17029 563 aaPredicted RBP8.29□□□□□ -1.08
VPS50-218ENST00000485994 PDE4AP27815 886 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 ADORA2AP29274 412 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 CCDC178Q5BJE1 867 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 AKNAD1Q5T1N1 836 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 MFSD14CQ5VZR4 134 aa8.29□□□□□ -1.08
VPS50-218ENST00000485994 ZNF589Q86UQ0 364 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms