RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 C9IYK1 514 aa6.83□□□□□ -1.32
SPTA1-207ENST00000485680 ZSCAN22P10073 491 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-207ENST00000485680 OXCT1P55809 520 aa6.83□□□□□ -1.32
SPTA1-207ENST00000485680 KCNMB1Q16558 191 aa6.83□□□□□ -1.32
SPTA1-207ENST00000485680 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
SPTA1-207ENST00000485680 HRASLS5Q96KN8 279 aa6.83□□□□□ -1.32
SPTA1-207ENST00000485680 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
SPTA1-207ENST00000485680 CNTNAP4Q9C0A0 1308 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 GOLGA3Q08378 1498 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 CLEC3AO75596 197 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 TP53P04637 393 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-207ENST00000485680 CCNFP41002 786 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 PMS1P54277 932 aaKnown RBP6.82□□□□□ -1.32
SPTA1-207ENST00000485680 GNPTABQ3T906 1256 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 ANGEL2Q5VTE6 544 aaKnown RBP6.82□□□□□ -1.32
SPTA1-207ENST00000485680 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 ANKLE2Q86XL3 938 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 MKL1Q969V6 931 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 LIN37Q96GY3 246 aaPredicted RBP6.82□□□□□ -1.32
SPTA1-207ENST00000485680 PPP1R16BQ96T49 567 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 PRDM7Q9NQW5 492 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 SUCOQ9UBS9 1254 aaKnown RBP6.82□□□□□ -1.32
SPTA1-207ENST00000485680 RAPGEFL1Q9UHV5 662 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 CEP131Q9UPN4 1083 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 SOGA1O94964 1423 aa6.82□□□□□ -1.32
SPTA1-207ENST00000485680 CEP164Q9UPV0 1460 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-207ENST00000485680 EOMESO95936 686 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 CEACAM5P06731 702 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 SLC7A5Q01650 507 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 NFE2L2Q16236 605 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 KREMEN1Q96MU8 473 aa6.81□□□□□ -1.32
SPTA1-207ENST00000485680 KRT1P04264 644 aa6.8□□□□□ -1.32
SPTA1-207ENST00000485680 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-207ENST00000485680 ZNF746Q6NUN9 644 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-207ENST00000485680 SYDE1Q6ZW31 735 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-207ENST00000485680 NOP9Q86U38 636 aaKnown RBP6.8□□□□□ -1.32
SPTA1-207ENST00000485680 JAZF1Q86VZ6 243 aa6.8□□□□□ -1.32
SPTA1-207ENST00000485680 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
SPTA1-207ENST00000485680 CCDC113Q9H0I3 377 aa6.8□□□□□ -1.32
SPTA1-207ENST00000485680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPTA1-207ENST00000485680 CFTRP13569 1480 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 PDPK1O15530 556 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 NCAPHQ15003 741 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 NBPF12Q5TAG4 269 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-207ENST00000485680 FYB2Q5VWT5 728 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 DNAJC7Q99615 494 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 MKRN2Q9H000 416 aaKnown RBP6.79□□□□□ -1.32
SPTA1-207ENST00000485680 TPX2Q9ULW0 747 aaKnown RBP6.79□□□□□ -1.32
SPTA1-207ENST00000485680 CTNND2Q9UQB3 1225 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 TOP2BQ02880 1626 aa6.79□□□□□ -1.32
SPTA1-207ENST00000485680 CEP162Q5TB80 1403 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 LRRN2O75325 713 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 EPHX1P07099 455 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 C1QTNF9P0C862 333 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 ETV3P41162 512 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 CHMP4BP1P59074 171 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 RASGRF1Q13972 1273 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 PRR23BQ6ZRT6 265 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 SPATC1Q76KD6 591 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 FAM214BQ7L5A3 538 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 LRP10Q7Z4F1 713 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 SUSD2Q9UGT4 822 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 TBX22Q9Y458 520 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 SNX11Q9Y5W9 270 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 SYNJ1O43426 1573 aa6.78□□□□□ -1.32
SPTA1-207ENST00000485680 KIF21BO75037 1637 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 CBFA2T2O43439 604 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 SUSD5O60279 629 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 BBS9Q3SYG4 887 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 MTERF2Q49AM1 385 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 HEXIM2Q96MH2 286 aaKnown RBP6.77□□□□□ -1.33
SPTA1-207ENST00000485680 HAUS7Q99871 368 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 PFDN2Q9UHV9 154 aa6.77□□□□□ -1.33
SPTA1-207ENST00000485680 MRPL42Q9Y6G3 142 aaKnown RBP6.77□□□□□ -1.33
SPTA1-207ENST00000485680 PRR33A8MZF0 331 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 SHOXO15266 292 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
SPTA1-207ENST00000485680 CBX7O95931 251 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 RNF4P78317 190 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 IFRD2Q12894 506 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-207ENST00000485680 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
SPTA1-207ENST00000485680 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 EEPD1Q7L9B9 569 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 FGD4Q96M96 766 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 LGR4Q9BXB1 951 aa6.76□□□□□ -1.33
SPTA1-207ENST00000485680 KLHL25Q9H0H3 589 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms