RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
SSR4-210ENST00000485612 EHD4Q9H223 541 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 FAM184BQ9ULE4 1060 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
SSR4-210ENST00000485612 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 A0A0G2JMZ2 1700 aa14.8□□□□□ -0.04
SSR4-210ENST00000485612 A0A0U1RQG5 324 aaPredicted RBP14.79□□□□□ -0.04
SSR4-210ENST00000485612 A0A1W2PRG0 241 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 MYADML2A6NDP7 307 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 SLC25A27O95847 323 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 CYP7A1P22680 504 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 USP5P45974 858 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
SSR4-210ENST00000485612 SEPT2Q15019 361 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 FAM126BQ8IXS8 530 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 FTSJ3Q8IY81 847 aaKnown RBP14.79□□□□□ -0.04
SSR4-210ENST00000485612 HLA-CQ95604 372 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 SLC4A7Q9Y6M7 1214 aa14.79□□□□□ -0.04
SSR4-210ENST00000485612 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
SSR4-210ENST00000485612 FLOT1O75955 427 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 ASGR1P07306 291 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 KCTD2Q14681 263 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
SSR4-210ENST00000485612 TTC6Q86TZ1 520 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 PCSK9Q8NBP7 692 aaKnown RBP14.78□□□□□ -0.04
SSR4-210ENST00000485612 ATG4CQ96DT6 458 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 PIEZO1Q92508 2521 aa14.78□□□□□ -0.04
SSR4-210ENST00000485612 DUSP11O75319 330 aaKnown RBP14.77□□□□□ -0.05
SSR4-210ENST00000485612 C6orf222P0C671 652 aaPredicted RBP14.77□□□□□ -0.05
SSR4-210ENST00000485612 CST5P28325 142 aaPredicted RBP14.77□□□□□ -0.05
SSR4-210ENST00000485612 SHMT1P34896 483 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 CEP85Q6P2H3 762 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 MAGEB6Q8N7X4 407 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 CERS4Q9HA82 394 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 CD320Q9NPF0 282 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.05
SSR4-210ENST00000485612 MUC6Q6W4X9 2439 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 LRRC37A2A6NM11 1700 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
SSR4-210ENST00000485612 CD4P01730 458 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
SSR4-210ENST00000485612 NHLH1Q02575 133 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 EVX2Q03828 476 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 KRT40Q6A162 431 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 RIOX2Q8IUF8 465 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 PANK1Q8TE04 598 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 UIMC1Q96RL1 719 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 HIPK3Q9H422 1215 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 ZHX1Q9UKY1 873 aaPredicted RBP14.76□□□□□ -0.05
SSR4-210ENST00000485612 GBF1Q92538 1859 aa14.76□□□□□ -0.05
SSR4-210ENST00000485612 ZBBXA8MT70 800 aa14.75□□□□□ -0.05
SSR4-210ENST00000485612 IGSF3O75054 1194 aa14.75□□□□□ -0.05
SSR4-210ENST00000485612 SNAI1O95863 264 aaPredicted RBP14.75□□□□□ -0.05
SSR4-210ENST00000485612 ATP2A2P16615 1042 aaKnown RBP14.75□□□□□ -0.05
SSR4-210ENST00000485612 PLCD1P51178 756 aa14.75□□□□□ -0.05
SSR4-210ENST00000485612 CCL23P55773 120 aa14.75□□□□□ -0.05
SSR4-210ENST00000485612 TMEM67Q5HYA8 995 aa14.75□□□□□ -0.05
SSR4-210ENST00000485612 RPUSD2Q8IZ73 545 aaKnown RBP14.75□□□□□ -0.05
SSR4-210ENST00000485612 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
SSR4-210ENST00000485612 UMODL1Q5DID0 1318 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 EPOPA6NHQ4 379 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 CA3P07451 260 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 STAT3P40763 770 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 AACSQ86V21 672 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 SPICE1Q8N0Z3 855 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 MIER1Q8N108 512 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
SSR4-210ENST00000485612 POLR3DP05423 398 aaPredicted RBP14.73□□□□□ -0.05
SSR4-210ENST00000485612 GJA9P57773 515 aa14.73□□□□□ -0.05
SSR4-210ENST00000485612 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
SSR4-210ENST00000485612 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
SSR4-210ENST00000485612 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
SSR4-210ENST00000485612 RIOK1Q9BRS2 568 aaKnown RBP14.73□□□□□ -0.05
SSR4-210ENST00000485612 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
SSR4-210ENST00000485612 ACVR2BQ13705 512 aa14.72□□□□□ -0.05
SSR4-210ENST00000485612 MAMDC4Q6UXC1 1216 aa14.72□□□□□ -0.05
SSR4-210ENST00000485612 GJD3Q8N144 294 aa14.72□□□□□ -0.05
SSR4-210ENST00000485612 ARNTL2Q8WYA1 636 aa14.72□□□□□ -0.05
SSR4-210ENST00000485612 UPF3AQ9H1J1 476 aaKnown RBP14.72□□□□□ -0.05
SSR4-210ENST00000485612 KCNH6Q9H252 994 aa14.72□□□□□ -0.05
SSR4-210ENST00000485612 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
SSR4-210ENST00000485612 MCM3APO60318 1980 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 WDR46O15213 610 aaKnown RBP14.71□□□□□ -0.05
SSR4-210ENST00000485612 ADCY6O43306 1168 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 ALADP13716 330 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 COPB2P35606 906 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 NOC4LQ9BVI4 516 aaKnown RBP14.71□□□□□ -0.05
SSR4-210ENST00000485612 WNT8AQ9H1J5 351 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 VCPKMTQ9H867 229 aa14.71□□□□□ -0.05
SSR4-210ENST00000485612 PRRC2BQ5JSZ5 2229 aaKnown RBP14.71□□□□□ -0.05
SSR4-210ENST00000485612 GABPAQ06546 454 aa14.7□□□□□ -0.06
SSR4-210ENST00000485612 TTLL4Q14679 1199 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms