RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-211ENST00000485592 MKNK2Q9HBH9 465 aa16.46■□□□□ 0.23
SMARCD3-211ENST00000485592 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
SMARCD3-211ENST00000485592 UNC80Q8N2C7 3258 aa16.46■□□□□ 0.22
SMARCD3-211ENST00000485592 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 ADAMTS4O75173 837 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 ITGB8P26012 769 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 TOX2Q96NM4 488 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
SMARCD3-211ENST00000485592 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 ACLYP53396 1101 aa16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 SBK1Q52WX2 424 aa16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 ANKRD33Q7Z3H0 272 aa16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 PRPF38AQ8NAV1 312 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
SMARCD3-211ENST00000485592 F5H6K3 240 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 ZBED4O75132 1171 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 NDUFB10O96000 172 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 RASA1P20936 1047 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 KLRC3Q07444 240 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 FAAP100Q0VG06 881 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
SMARCD3-211ENST00000485592 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 ATP2A1O14983 1001 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 DUSP11O75319 330 aaKnown RBP16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 SNAI1O95863 264 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 EPHB4P54760 987 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 KCNA10Q16322 511 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 PCSK9Q8NBP7 692 aaKnown RBP16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 KLHDC9Q8NEP7 349 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 GPATCH3Q96I76 525 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
SMARCD3-211ENST00000485592 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 CST5P28325 142 aaPredicted RBP16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 ACVR2BQ13705 512 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 ZNF444Q8N0Y2 327 aaPredicted RBP16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 APPBP2Q92624 585 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 CLIP2Q9UDT6 1046 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 ELP1O95163 1332 aa16.41■□□□□ 0.22
SMARCD3-211ENST00000485592 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 TIMP1P01033 207 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 GNAT2P19087 354 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 DNAJB2P25686 324 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 TDO2P48775 406 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 CHST13Q8NET6 341 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 SYMPKQ92797 1274 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 ABHD16BQ9H3Z7 469 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 MCM3APO60318 1980 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 CUL9Q8IWT3 2517 aa16.4■□□□□ 0.22
SMARCD3-211ENST00000485592 A0A0U1RQG5 324 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 ASGR1P07306 291 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 OAZ1P54368 228 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 CCSAPQ6IQ19 270 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 MFSD5Q6N075 450 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 TBX21Q9UL17 535 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
SMARCD3-211ENST00000485592 IGKV6D-41A0A0C4DH26 115 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 GPAA1O43292 621 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 TTLL1O95922 423 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 APPP05067 770 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 ARMCX2Q7L311 632 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms