RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 USP14P54578 494 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 CCL23P55773 120 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 TAP1Q03518 808 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 KCNA10Q16322 511 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 PTPROQ16827 1216 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 CRACR2BQ8N4Y2 399 aaPredicted RBP7.81□□□□□ -1.16
CAPN13-206ENST00000485248 CHAMP1Q96JM3 812 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 HERC5Q9UII4 1024 aaKnown RBP7.81□□□□□ -1.16
CAPN13-206ENST00000485248 CFAP54Q96N23 3096 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 KMT2EQ8IZD2 1858 aa7.81□□□□□ -1.16
CAPN13-206ENST00000485248 COL4A6Q14031 1691 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 RAD21O60216 631 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 C6orf222P0C671 652 aaPredicted RBP7.8□□□□□ -1.16
CAPN13-206ENST00000485248 PRDX5P30044 214 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 PLS1Q14651 629 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.16
CAPN13-206ENST00000485248 ZYXQ15942 572 aaKnown RBP7.8□□□□□ -1.16
CAPN13-206ENST00000485248 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 NCAPG2Q86XI2 1143 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 PHOSPHO2Q8TCD6 241 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 DDX12PQ92771 950 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 IPO9Q96P70 1041 aaKnown RBP7.8□□□□□ -1.16
CAPN13-206ENST00000485248 HINFPQ9BQA5 517 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 MTUS1Q9ULD2 1270 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 ROBO3Q96MS0 1386 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 MYH2Q9UKX2 1941 aa7.8□□□□□ -1.16
CAPN13-206ENST00000485248 SYNRGQ9UMZ2 1314 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 FCER1AP12319 257 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 BTDP43251 543 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 CALD1Q05682 793 aaKnown RBP7.79□□□□□ -1.16
CAPN13-206ENST00000485248 PTGDRQ13258 359 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
CAPN13-206ENST00000485248 TIGD5Q53EQ6 642 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 RNF135Q8IUD6 432 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 LINS1Q8NG48 757 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 KCNG4Q8TDN1 519 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 MS4A3Q96HJ5 214 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 MAML3Q96JK9 1138 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 NOL10Q9BSC4 688 aaKnown RBP7.79□□□□□ -1.16
CAPN13-206ENST00000485248 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 GINM1Q9NU53 330 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 FAM184BQ9ULE4 1060 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 PLXNA3P51805 1871 aa7.79□□□□□ -1.16
CAPN13-206ENST00000485248 KIF16BQ96L93 1317 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 C19orf67A6NJJ6 358 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 ADAMTS4O75173 837 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 CNMDO75829 334 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 ASGR1P07306 291 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 SLURP2P0DP57 97 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 ERCC3P19447 782 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 AVPR2P30518 371 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 NBL1P41271 181 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 FOXO4P98177 505 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 PUM3Q15397 648 aaKnown RBP7.78□□□□□ -1.16
CAPN13-206ENST00000485248 DEFB128Q7Z7B8 93 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 HERC6Q8IVU3 1022 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 SHCBP1Q8NEM2 672 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 DNAAF4Q8WXU2 420 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 FTOQ9C0B1 505 aaKnown RBP eCLIP7.78□□□□□ -1.16
CAPN13-206ENST00000485248 SIL1Q9H173 461 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 MROH8Q9H579 483 aa7.78□□□□□ -1.16
CAPN13-206ENST00000485248 C9orf78Q9NZ63 289 aaPredicted RBP7.78□□□□□ -1.16
CAPN13-206ENST00000485248 ZHX1Q9UKY1 873 aaPredicted RBP7.78□□□□□ -1.16
CAPN13-206ENST00000485248 COL11A1P12107 1806 aaPredicted RBP7.78□□□□□ -1.16
CAPN13-206ENST00000485248 C5orf42Q9H799 3197 aa7.77□□□□□ -1.16
CAPN13-206ENST00000485248 REV3LO60673 3130 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 RFX7Q2KHR2 1363 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 A0A1B0GUL7 405 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 C2orf72A6NCS6 295 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 LPXNO60711 386 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 PDE8BO95263 885 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 CD44P16070 742 aaKnown RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 CDK7P50613 346 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 CASP7P55210 303 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 GNAI1P63096 354 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 SIGLEC14Q08ET2 396 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 TTLL4Q14679 1199 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 ABRAQ8N0Z2 381 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 RETREG2Q8NC44 543 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 NEK9Q8TD19 979 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 LENG1Q96BZ8 264 aaPredicted RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 RMDN1Q96DB5 314 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 PABPC5Q96DU9 382 aaKnown RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 SCLYQ96I15 445 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 TGS1Q96RS0 853 aaKnown RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 TINF2Q9BSI4 451 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 SEZ6LQ9BYH1 1024 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 SPATC1LQ9H0A9 340 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 DDX4Q9NQI0 724 aaKnown RBP7.77□□□□□ -1.17
CAPN13-206ENST00000485248 CLDND1Q9NY35 253 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 PI4KBQ9UBF8 816 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 ABCF2Q9UG63 623 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
CAPN13-206ENST00000485248 PKD1L2Q7Z442 2459 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms