RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 NPR1P16066 1061 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 ZNF18P17022 549 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 BMP6P22004 513 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 GNA11P29992 359 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 PDE6BP35913 854 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 PRPHP41219 470 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 SYCP1Q15431 976 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 ZNF174Q15697 407 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 GRIK5Q16478 980 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 EARS2Q5JPH6 523 aaKnown RBP8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 SPECC1Q5M775 1068 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 PIK3AP1Q6ZUJ8 805 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 TMC6Q7Z403 805 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 VSTM4Q8IW00 320 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 MAPKAPK5Q8IW41 473 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 CCAR2Q8N163 923 aaKnown RBP8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 DHX58Q96C10 678 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 TMX4Q9H1E5 349 aaPredicted RBP8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 RMND1Q9NWS8 449 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 BARHL2Q9NY43 387 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 POLLQ9UGP5 575 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 SWAP70Q9UH65 585 aa8.39□□□□□ -1.07
SHROOM3-206ENST00000484236 RGPD3A6NKT7 1758 aaPredicted RBP8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 RGPD4Q7Z3J3 1758 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 hCG_1642624A0A1W2PR95 340 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 VWA3AA6NCI4 1184 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 USP17L3A6NCW0 530 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 USP17L4A6NCW7 530 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 STXBP3O00186 592 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 FOXN1O15353 648 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 DPYDQ12882 1025 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 PTPN14Q15678 1187 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 E2F4Q16254 413 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 SPATA1Q5VX52 437 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 ISM2Q6H9L7 571 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 ARMCX5Q6P1M9 558 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 NYAP1Q6ZVC0 841 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 USP17L1Q7RTZ2 530 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 STAG2Q8N3U4 1231 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 C4orf32Q8N8J7 132 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 EPSTI1Q96J88 318 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 AK8Q96MA6 479 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 CTAGE1Q96RT6 745 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 MRIQ9BWK5 157 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 GTPBP4Q9BZE4 634 aaKnown RBP8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 ZC3H12CQ9C0D7 883 aaKnown RBP8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 ZMYND12Q9H0C1 365 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 PDCL3Q9H2J4 239 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 MAGEF1Q9HAY2 307 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 C6orf50Q9HD87 102 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 FANCLQ9NW38 375 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 STX8Q9UNK0 236 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 NFE2L3Q9Y4A8 694 aa8.38□□□□□ -1.07
SHROOM3-206ENST00000484236 GREB1LQ9C091 1923 aaPredicted RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 KLRF2D3W0D1 207 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 CTIFO43310 598 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 CYTH3O43739 400 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 TRIM37O94972 964 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 SRGNP10124 158 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 ATP1A3P13637 1013 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 CDK11BP21127 795 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 HOXA7P31268 230 aaPredicted RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 GABPAQ06546 454 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 ASPRV1Q53RT3 343 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 PDXDC2PQ6P474 469 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 DTHD1Q6ZMT9 781 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 USP49Q70CQ1 688 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 PDILTQ8N807 584 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 MASTLQ96GX5 879 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 CCSER1Q9C0I3 900 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 CUEDC2Q9H467 287 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 SEC63Q9UGP8 760 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
SHROOM3-206ENST00000484236 A0A087X0B3 334 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 IGKV6D-41A0A0C4DH26 115 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 A0A1B0GTH6 734 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 WNT7AO00755 349 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 MCM7P33993 719 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 GTF2IP78347 998 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 HDLBPQ00341 1268 aaKnown RBP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 FMR1Q06787 632 aaKnown RBP eCLIP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 SPAG1Q07617 926 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms