RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ADCY1Q08828 1119 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 NAA30Q147X3 362 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 RPGRQ92834 1020 aaKnown RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 PTPN22Q9Y2R2 807 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 ZBTB41Q5SVQ8 909 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 NUGGCQ68CJ6 796 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 OTUD6AQ7L8S5 288 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 TMCO5AQ8N6Q1 288 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 CCDC124Q96CT7 223 aaKnown RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 PAWRQ96IZ0 340 aaKnown RBP11.21□□□□□ -0.62
COL12A1-207ENST00000483888 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.62
COL12A1-207ENST00000483888 MYH10P35580 1976 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 MYD88Q99836 296 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 CFTRP13569 1480 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 GOLGA8QA0A0J9YX86 632 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 GOLGA8OA6NCC3 632 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 GOLGA8NF8WBI6 632 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 DPH6Q7L8W6 267 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 TLK2Q86UE8 772 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 RNF169Q8NCN4 708 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 SNX29Q8TEQ0 813 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 CXCR5P32302 372 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 SV2BQ7L1I2 683 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 KIFC3Q9BVG8 833 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 RASGRF2O14827 1237 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 CALML3P27482 149 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 MRPL28Q13084 256 aaKnown RBP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 PLAAQ9Y263 795 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 APOA1P02647 267 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 MAML1Q92585 1016 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 BAG5Q9UL15 447 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 C1orf146Q5VVC0 180 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 NANOGNBQ7Z5D8 188 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 HIPK4Q8NE63 616 aa11.2□□□□□ -0.62
COL12A1-207ENST00000483888 FTOQ9C0B1 505 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL12A1-207ENST00000483888 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 PDE4BQ07343 736 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 THAP11Q96EK4 314 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 SMYD3Q9H7B4 428 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 NDE1Q9NXR1 346 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 CCDC84Q86UT8 332 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ANKRD35Q8N283 1001 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 PASKQ96RG2 1323 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 CAPN1P07384 714 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 PAX7P23759 505 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 SYCE1LA8MT33 242 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ATF2P15336 505 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 SERPINB4P48594 390 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 MRPS35P82673 323 aaKnown RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ZNF174Q15697 407 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 LIN9Q5TKA1 542 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ANKFY1Q9P2R3 1169 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 GNGT2O14610 69 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 HDAC4P56524 1084 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 MORC3Q14149 939 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 KRT82Q9NSB4 513 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 IL16Q14005 1332 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ART3Q13508 389 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 TMED2Q15363 201 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 TEKT4Q8WW24 435 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 LRRC37BQ96QE4 947 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 TBK1Q9UHD2 729 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 RXRAP19793 462 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 STAT2P52630 851 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 CABP4P57796 275 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 LONP2Q86WA8 852 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ABTB2Q8N961 1025 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ANKRD7Q92527 254 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 CARD9Q9H257 536 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ANTXR1Q9H6X2 564 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 KRT7P08729 469 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 EIF3BP55884 814 aaKnown RBP11.19□□□□□ -0.62
COL12A1-207ENST00000483888 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 ANO5Q75V66 913 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
COL12A1-207ENST00000483888 STK10O94804 968 aaKnown RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 KRT79Q5XKE5 535 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 FLOT2Q14254 428 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms