RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 SRRTQ9BXP5 876 aaKnown RBP4.23□□□□□ -1.73
ZNF561-216ENST00000483768 CCDC113Q9H0I3 377 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 PICK1Q9NRD5 415 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 KRT82Q9NSB4 513 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 MSRB2Q9Y3D2 182 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 LAS1LQ9Y4W2 734 aaKnown RBP4.23□□□□□ -1.73
ZNF561-216ENST00000483768 CD2APQ9Y5K6 639 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 U3KQE9 123 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 RAPGEF2Q9Y4G8 1499 aa4.23□□□□□ -1.73
ZNF561-216ENST00000483768 CCDC189A1A4V9 331 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 HMGB1P1B2RPK0 211 aaPredicted RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 BIN1O00499 593 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PDPK1O15530 556 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PAPLNO95428 1278 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 ASMTLO95671 621 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 NEFMP07197 916 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 C8AP07357 584 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 CD8BP10966 210 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 ARNTP27540 789 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 EXOSC10Q01780 885 aaKnown RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 FOXD4Q12950 439 aaPredicted RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 OS9Q13438 667 aaPredicted RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 CCDC85BQ15834 202 aaPredicted RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 DDR2Q16832 855 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 AOC3Q16853 763 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 LONRF3Q496Y0 759 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 SYCP2LQ5T4T6 812 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PCNX4Q63HM2 1172 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PPP4R4Q6NUP7 873 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 FBXL19Q6PCT2 694 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PDZD3Q86UT5 571 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 FAM169BQ8N8A8 192 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 ISL2Q96A47 359 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 RSRP1Q9BUV0 290 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 DUSP23Q9BVJ7 150 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 TMX1Q9H3N1 280 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 RC3H2Q9HBD1 1191 aaKnown RBP4.22□□□□□ -1.73
ZNF561-216ENST00000483768 UBP1Q9NZI7 540 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PFDN2Q9UHV9 154 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 ATP8A1Q9Y2Q0 1164 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 PCDHGC5Q9Y5F6 944 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 CSADQ9Y600 493 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 IQSEC2Q5JU85 1478 aa4.22□□□□□ -1.73
ZNF561-216ENST00000483768 C9orf84Q5VXU9 1444 aa4.21□□□□□ -1.73
ZNF561-216ENST00000483768 SCAPERQ9BY12 1400 aa4.21□□□□□ -1.73
ZNF561-216ENST00000483768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.21□□□□□ -1.73
ZNF561-216ENST00000483768 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 TSPAN6O43657 245 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 PLIN1O60240 522 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 LDHAP00338 332 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 VIL1P09327 827 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 FUT4P22083 530 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 SAFB2Q14151 953 aaKnown RBP eCLIP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 IFI16Q16666 785 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 C2orf27AQ580R0 203 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 DALRD3Q5D0E6 543 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 ZNF648Q5T619 568 aaPredicted RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 LARP1BQ659C4 914 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 CCSAPQ6IQ19 270 aaPredicted RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 MPRIPQ6WCQ1 1025 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 TPTE2Q6XPS3 522 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 KRT26Q7Z3Y9 468 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 DDX42Q86XP3 938 aaKnown RBP eCLIP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 WFDC3Q8IUB2 231 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 POU5F2Q8N7G0 328 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 PI4K2BQ8TCG2 481 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 GPBAR1Q8TDU6 330 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 SHDQ96IW2 340 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 TMEM74Q96NL1 305 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 NOC4LQ9BVI4 516 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 EMILIN2Q9BXX0 1053 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 ACTR10Q9NZ32 417 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 VAV3Q9UKW4 847 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 PPT2Q9UMR5 302 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 MAPK8IP1Q9UQF2 711 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 PTCH2Q9Y6C5 1203 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 COMMD10Q9Y6G5 202 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 NUP153P49790 1475 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 CTTNBP2Q8WZ74 1663 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 CDK13Q14004 1512 aaKnown RBP4.21□□□□□ -1.74
ZNF561-216ENST00000483768 KDM2BQ8NHM5 1336 aa4.21□□□□□ -1.74
ZNF561-216ENST00000483768 ATP10AO60312 1499 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 TMEM265A0A087WTH1 108 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 KIF3BO15066 747 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 MAFGO15525 162 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 DIAPH1O60610 1272 aaKnown RBP4.2□□□□□ -1.74
ZNF561-216ENST00000483768 FBXO24O75426 580 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 ALDH1L1O75891 902 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 KRT18P05783 430 aaKnown RBP4.2□□□□□ -1.74
ZNF561-216ENST00000483768 CEACAM5P06731 702 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 RNASE1P07998 156 aaKnown RBP4.2□□□□□ -1.74
ZNF561-216ENST00000483768 POU3F3P20264 500 aaPredicted RBP4.2□□□□□ -1.74
ZNF561-216ENST00000483768 NME2P22392 152 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 PRKCQQ04759 706 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 PWP1Q13610 501 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 RASGRF1Q13972 1273 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 PPP2R5AQ15172 486 aa4.2□□□□□ -1.74
ZNF561-216ENST00000483768 TTF1Q15361 905 aaPredicted RBP4.2□□□□□ -1.74
ZNF561-216ENST00000483768 TCEA2Q15560 299 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms