RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 MOGSQ13724 837 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 BECN1Q14457 450 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 CCL15Q16663 113 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 TMTC3Q6ZXV5 915 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 NUP88Q99567 741 aaPredicted RBP12.2□□□□□ -0.46
CCDC57-209ENST00000483145 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 NCOA5Q9HCD5 579 aaKnown RBP12.2□□□□□ -0.46
CCDC57-209ENST00000483145 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
CCDC57-209ENST00000483145 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
CCDC57-209ENST00000483145 KLRF2D3W0D1 207 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 CPLX1O14810 134 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 GOLGA8HP0CJ92 632 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
CCDC57-209ENST00000483145 RGS19P49795 217 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 STAT2P52630 851 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 CRHR2Q13324 411 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 CUL4AQ13619 759 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
CCDC57-209ENST00000483145 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
CCDC57-209ENST00000483145 BTNL9Q6UXG8 535 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 GADL1Q6ZQY3 521 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 STAG2Q8N3U4 1231 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 ERO1AQ96HE7 468 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 SPZ1Q9BXG8 430 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
CCDC57-209ENST00000483145 SLC45A1Q9Y2W3 748 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
CCDC57-209ENST00000483145 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 CNTNAP5Q8WYK1 1306 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 CDKL5O76039 1030 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 IFNAR1P17181 557 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
CCDC57-209ENST00000483145 SOX10P56693 466 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 FUT2Q10981 343 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC57-209ENST00000483145 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
CCDC57-209ENST00000483145 NTRK3Q16288 839 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 CCDC83Q8IWF9 413 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 BRI3BPQ8WY22 251 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 PTPN18Q99952 460 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
CCDC57-209ENST00000483145 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
CCDC57-209ENST00000483145 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
CCDC57-209ENST00000483145 FLOT1O75955 427 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 SP3Q02447 781 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 IKQ13123 557 aaPredicted RBP12.17□□□□□ -0.46
CCDC57-209ENST00000483145 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 ANKRD23Q86SG2 305 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
CCDC57-209ENST00000483145 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
CCDC57-209ENST00000483145 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
CCDC57-209ENST00000483145 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
CCDC57-209ENST00000483145 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
CCDC57-209ENST00000483145 STK36Q9NRP7 1315 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 BTBD19C9JJ37 291 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 CYTH3O43739 400 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 CTDNEP1O95476 244 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 SLC16A2P36021 539 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
CCDC57-209ENST00000483145 NSUN7Q8NE18 718 aaKnown RBP12.16□□□□□ -0.46
CCDC57-209ENST00000483145 CD99L2Q8TCZ2 262 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 MTMR8Q96EF0 704 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
CCDC57-209ENST00000483145 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
CCDC57-209ENST00000483145 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
CCDC57-209ENST00000483145 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms