RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZNF214Q9UL59 606 aaPredicted RBP16.39■□□□□ 0.21
VARS-225ENST00000482996 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 RAD50Q92878 1312 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 MCCP23508 829 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 STAT2P52630 851 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 KCTD2Q14681 263 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 IMMTQ16891 758 aaKnown RBP16.38■□□□□ 0.21
VARS-225ENST00000482996 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
VARS-225ENST00000482996 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 ESR2Q92731 530 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 MMP19Q99542 508 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 TCP11L1Q9NUJ3 509 aa16.38■□□□□ 0.21
VARS-225ENST00000482996 ATP2A1O14983 1001 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
VARS-225ENST00000482996 NOVP48745 357 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 OLFML2BQ68BL8 750 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 UBE2Q1Q7Z7E8 422 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 CEP290O15078 2479 aa16.37■□□□□ 0.21
VARS-225ENST00000482996 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
VARS-225ENST00000482996 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 PLA2G6O60733 806 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 COBLO75128 1261 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 OAZ1P54368 228 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 RCSD1Q6JBY9 416 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
VARS-225ENST00000482996 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 CHMP4CQ96CF2 233 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
VARS-225ENST00000482996 CHMLP26374 656 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
VARS-225ENST00000482996 CYP2C19P33261 490 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 NECAB2Q7Z6G3 386 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 TTC14Q96N46 770 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 TMEM47Q9BQJ4 181 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
VARS-225ENST00000482996 OGDHLQ9ULD0 1010 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 NEDD4P46934 1319 aa16.35■□□□□ 0.21
VARS-225ENST00000482996 MSCO60682 206 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 CNGA1P29973 690 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 DPF3Q92784 378 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 MAML3Q96JK9 1138 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
VARS-225ENST00000482996 KDM4AO75164 1064 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 PGK2P07205 417 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 PAWRQ96IZ0 340 aaKnown RBP16.33■□□□□ 0.2
VARS-225ENST00000482996 KRT23Q9C075 422 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 IL25Q9H293 177 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
VARS-225ENST00000482996 RIPK3Q9Y572 518 aa16.33■□□□□ 0.2
VARS-225ENST00000482996 IGHA2P01877 340 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 CYBAP13498 195 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 ZNF792Q3KQV3 632 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 LHX8Q68G74 356 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 DGKHQ86XP1 1220 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 ANKRD35Q8N283 1001 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 DDX20Q9UHI6 824 aaKnown RBP16.32■□□□□ 0.2
VARS-225ENST00000482996 PRR12Q9ULL5 1215 aa16.32■□□□□ 0.2
VARS-225ENST00000482996 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 B4E1Z4 1266 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 SGSM2O43147 1006 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.2
VARS-225ENST00000482996 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
VARS-225ENST00000482996 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 NR2E3Q9Y5X4 410 aa16.31■□□□□ 0.2
VARS-225ENST00000482996 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
VARS-225ENST00000482996 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
VARS-225ENST00000482996 PDHBP11177 359 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 TRDNQ13061 729 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 CCDC174Q6PII3 467 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 RASGRP2Q7LDG7 609 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 TRPV1Q8NER1 839 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
VARS-225ENST00000482996 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 KAT14Q9H8E8 782 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 GPCPD1Q9NPB8 672 aa16.3■□□□□ 0.2
VARS-225ENST00000482996 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms