RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 FEZ1Q99689 392 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 MAD2L2Q9UI95 211 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 SYNPO2Q9UMS6 1093 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 FRMPD2Q68DX3 1309 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 CNTNAP5Q8WYK1 1306 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 MYH4Q9Y623 1939 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 PALM3A6NDB9 673 aaPredicted RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 CTNND1O60716 968 aaKnown RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 PDHBP11177 359 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 SLC1A4P43007 532 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 IKQ13123 557 aaPredicted RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 NBPF11Q86T75 865 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 STAG2Q8N3U4 1231 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 FBXO18Q8NFZ0 1043 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 MKL1Q969V6 931 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 GPCPD1Q9NPB8 672 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
TSPAN1-208ENST00000482928 SCG2P13521 617 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 KRT85P78386 507 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 MAP3K10Q02779 954 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 KRT40Q6A162 431 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 GMCL1P1Q8NEA9 526 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 PGAP2Q9UHJ9 254 aa14.38□□□□□ -0.11
TSPAN1-208ENST00000482928 CENPFP49454 3210 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 MYH6P13533 1939 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 TBC1D8O95759 1140 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 SHROOM1Q2M3G4 852 aaPredicted RBP14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 CCDC148Q8NFR7 591 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 AIFM3Q96NN9 605 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 WRNIP1Q96S55 665 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 PRO3102Q9H379 93 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 VAT1LQ9HCJ6 419 aa14.37□□□□□ -0.11
TSPAN1-208ENST00000482928 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 F5H6K3 240 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 PPP1R12BO60237 982 aaPredicted RBP14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 GUCY1A2P33402 732 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 NLRP5P59047 1200 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 KLRC3Q07444 240 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 FUT2Q10981 343 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 RESTQ13127 1097 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 RRP1BQ14684 758 aaKnown RBP14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 Q7L0L9 218 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 VPS54Q9P1Q0 977 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 CFAP45Q9UL16 551 aa14.36□□□□□ -0.11
TSPAN1-208ENST00000482928 A0A1W2PPC1 479 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 PHF20L1A8MW92 1017 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 ADM5C9JUS6 153 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 NDUFB10O96000 172 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 MMP1P03956 469 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 SNHG28P0DPA3 235 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 BMP3P12645 472 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 CALML3P27482 149 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 KRT2P35908 639 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 PRKG1Q13976 671 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 KCTD1Q719H9 257 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 SCYL3Q8IZE3 742 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 SH3GLB2Q9NR46 395 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 TMX2Q9Y320 296 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 ATAD5Q96QE3 1844 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 HTTP42858 3142 aa14.35□□□□□ -0.11
TSPAN1-208ENST00000482928 hCG_1984214I3L0E3 225 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 GPR25O00155 361 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 FIBPO43427 364 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 SLC10A3P09131 477 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 IREB2P48200 963 aaKnown RBP14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 JAG1P78504 1218 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 DNM1Q05193 864 aaKnown RBP14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 ZNF713Q8N859 430 aaPredicted RBP14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 KCNJ14Q9UNX9 436 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 CNPY2Q9Y2B0 182 aa14.34□□□□□ -0.11
TSPAN1-208ENST00000482928 CSADQ9Y600 493 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms