RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 LRRC41Q15345 812 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
FAM3D-202ENST00000482623 RNF180Q86T96 592 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 FAM160B2Q86V87 743 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 CEP95Q96GE4 821 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 GMCL1Q96IK5 515 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 PHF24Q9UPV7 400 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 CTDP1Q9Y5B0 961 aaPredicted RBP14.38□□□□□ -0.11
FAM3D-202ENST00000482623 A0A0G2JMZ2 1700 aa14.38□□□□□ -0.11
FAM3D-202ENST00000482623 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
FAM3D-202ENST00000482623 BMP3P12645 472 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 SYN1P17600 705 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 NOVP48745 357 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 GJC2Q5T442 439 aaPredicted RBP14.37□□□□□ -0.11
FAM3D-202ENST00000482623 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
FAM3D-202ENST00000482623 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 FAM184BQ9ULE4 1060 aa14.37□□□□□ -0.11
FAM3D-202ENST00000482623 RAD21O60216 631 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
FAM3D-202ENST00000482623 RTP1P59025 263 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 TFAP4Q01664 338 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 STAG1Q8WVM7 1258 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 TOX2Q96NM4 488 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 XPNPEP3Q9NQH7 507 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
FAM3D-202ENST00000482623 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 MOXD2PA6NHM9 499 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 SOX1O00570 391 aaPredicted RBP14.35□□□□□ -0.11
FAM3D-202ENST00000482623 ORC4O43929 436 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 PGK2P07205 417 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 STAT2P52630 851 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 PDE1AP54750 535 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 NKX3-2P78367 333 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 NUP133Q8WUM0 1156 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 SEC62Q99442 399 aaKnown RBP14.35□□□□□ -0.11
FAM3D-202ENST00000482623 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 TCP11L1Q9NUJ3 509 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 PNMA2Q9UL42 364 aa14.35□□□□□ -0.11
FAM3D-202ENST00000482623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
FAM3D-202ENST00000482623 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
FAM3D-202ENST00000482623 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
FAM3D-202ENST00000482623 PRDM1O75626 825 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 SNAI1O95863 264 aaPredicted RBP14.34□□□□□ -0.11
FAM3D-202ENST00000482623 ADCYAP1R1P41586 468 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 SLC1A4P43007 532 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
FAM3D-202ENST00000482623 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 KIFC2Q96AC6 838 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
FAM3D-202ENST00000482623 SEZ6LQ9BYH1 1024 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 MYH7P12883 1935 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 ZMYM6O95789 1325 aa14.34□□□□□ -0.11
FAM3D-202ENST00000482623 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.11
FAM3D-202ENST00000482623 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 POTEB2H3BUK9 544 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 ATN1P54259 1190 aaPredicted RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 ANKRD33Q7Z3H0 272 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 KLHDC9Q8NEP7 349 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 OTUD7AQ8TE49 926 aaPredicted RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 TTC14Q96N46 770 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 MAF1Q9H063 256 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
FAM3D-202ENST00000482623 SPC25Q9HBM1 224 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 ELP1O95163 1332 aa14.33□□□□□ -0.12
FAM3D-202ENST00000482623 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 ADAMTS4O75173 837 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
FAM3D-202ENST00000482623 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 CPXCR1Q8N123 301 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 STK11IPQ8N1F8 1099 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 ACAD9Q9H845 621 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
FAM3D-202ENST00000482623 IL17RBQ9NRM6 502 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 ALPK3Q96L96 1907 aa14.32□□□□□ -0.12
FAM3D-202ENST00000482623 MYH8P13535 1937 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 ASB14A6NK59 587 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 FOXP2O15409 715 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 FGAP02671 866 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
FAM3D-202ENST00000482623 CCSAPQ6IQ19 270 aaPredicted RBP14.31□□□□□ -0.12
FAM3D-202ENST00000482623 BTNL9Q6UXG8 535 aa14.31□□□□□ -0.12
FAM3D-202ENST00000482623 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms