RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MAFGO15525 162 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 CYP27B1O15528 508 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 SGSM2O43147 1006 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 NDUFB5O43674 189 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 IL2RBP14784 551 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 GCKRQ14397 625 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 PMM1Q92871 262 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 ZNF496Q96IT1 587 aaPredicted RBP9.17□□□□□ -0.94
SNX13-208ENST00000482558 DUSP9Q99956 384 aaKnown RBP9.17□□□□□ -0.94
SNX13-208ENST00000482558 COPRSQ9NQ92 184 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 LAMB4A4D0S4 1761 aa9.17□□□□□ -0.94
SNX13-208ENST00000482558 RFX7Q2KHR2 1363 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 TREHO43280 583 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 DNAJC6O75061 913 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 RGS9O75916 674 aaPredicted RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 S100BP04271 92 aaPredicted RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 HSPA4P34932 840 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 NEK4P51957 841 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 DAB2P98082 770 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 TBC1D8BQ0IIM8 1120 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 PSMD2Q13200 908 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 PROSER3Q2NL68 480 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 COPS6Q7L5N1 327 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 ETFBKMTQ8IXQ9 262 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 DMRTC2Q8IXT2 367 aaPredicted RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 XAGE3Q8WTP9 111 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 WFDC12Q8WWY7 111 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 IL1RAPL2Q9NP60 686 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
SNX13-208ENST00000482558 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 XIRP1Q702N8 1843 aaKnown RBP9.16□□□□□ -0.94
SNX13-208ENST00000482558 COL5A2P05997 1499 aaPredicted RBP9.15□□□□□ -0.94
SNX13-208ENST00000482558 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 GOLGA6L3A6NEY3 463 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 TGFBR3LH3BV60 316 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 CREB3O43889 395 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 CUL4AQ13619 759 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 PCSK7Q16549 785 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 RABL6Q3YEC7 729 aaPredicted RBP9.15□□□□□ -0.94
SNX13-208ENST00000482558 TM6SF1Q9BZW5 370 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 SPC25Q9HBM1 224 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 ATG3Q9NT62 314 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 NAGPAQ9UK23 515 aa9.15□□□□□ -0.94
SNX13-208ENST00000482558 ENPP3O14638 875 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 ANXA1P04083 346 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
SNX13-208ENST00000482558 ZAP70P43403 619 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 MRE11P49959 708 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 EVA1CP58658 441 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 AIMP1Q12904 312 aaKnown RBP9.14□□□□□ -0.95
SNX13-208ENST00000482558 SLC39A6Q13433 755 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 CHRNA2Q15822 529 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 CWF19L2Q2TBE0 894 aaKnown RBP9.14□□□□□ -0.95
SNX13-208ENST00000482558 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 MSL1Q68DK7 614 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 LRP10Q7Z4F1 713 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 AACSQ86V21 672 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 ATCAYQ86WG3 371 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 TREML1Q86YW5 311 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 CCDC191Q8NCU4 936 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 IGFLR1Q9H665 355 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
SNX13-208ENST00000482558 GPR108Q9NPR9 543 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 STRCQ7RTU9 1775 aa9.14□□□□□ -0.95
SNX13-208ENST00000482558 C5P01031 1676 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 NHSL1Q5SYE7 1610 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 ZBTB39O15060 712 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 CYP2E1P05181 493 aaPredicted RBP9.13□□□□□ -0.95
SNX13-208ENST00000482558 MYL6BP14649 208 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 PSMA5P28066 241 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 HSPA2P54652 639 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 KLHL40Q2TBA0 621 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 IER5Q5VY09 327 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 ZSCAN31Q96LW9 406 aaPredicted RBP9.13□□□□□ -0.95
SNX13-208ENST00000482558 MYD88Q99836 296 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 DDX56Q9NY93 547 aaKnown RBP9.13□□□□□ -0.95
SNX13-208ENST00000482558 FRRS1LQ9P0K9 344 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 BCS1LQ9Y276 419 aa9.13□□□□□ -0.95
SNX13-208ENST00000482558 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.13□□□□□ -0.95
SNX13-208ENST00000482558 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 FSD2A1L4K1 749 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
SNX13-208ENST00000482558 FZD6O60353 706 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
SNX13-208ENST00000482558 ATP5JP18859 108 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 NOS3P29474 1203 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 MAPK8P45983 427 aa9.12□□□□□ -0.95
SNX13-208ENST00000482558 ATP2B2Q01814 1243 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms