RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 SEMA3EO15041 775 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 TRIM37O94972 964 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 ERCC5P28715 1186 aaPredicted RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 FBXO38Q6PIJ6 1188 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 NELFCDQ8IXH7 590 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 PCDHA4Q9UN74 947 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 SEC31AO94979 1220 aaKnown RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 CACNB3P54284 484 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 CALCRLQ16602 461 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 USH1GQ495M9 461 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 CLEC10AQ8IUN9 316 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 GDAP1L1Q96MZ0 367 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 TMEM47Q9BQJ4 181 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 TUBE1Q9UJT0 475 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 TRAF5O00463 557 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 STX10O60499 249 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 VEGFAP15692 232 aaPredicted RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 TROAPQ12815 778 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 NBPF11Q86T75 865 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
CALD1-220ENST00000482470 ACBD3Q9H3P7 528 aa10.26□□□□□ -0.77
CALD1-220ENST00000482470 RIC1Q4ADV7 1423 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 USO1O60763 962 aaKnown RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 CYLC1P35663 651 aaPredicted RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 CDK8P49336 464 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 COPB1P53618 953 aaKnown RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 CHMP4BP1P59074 171 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 GRAPQ13588 217 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 KRT25Q7Z3Z0 450 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 GRAPLQ8TC17 118 aaPredicted RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 TMOD2Q9NZR1 351 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 OR52Z1P0C646 297 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 NCAPHQ15003 741 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 PFKFB3Q16875 520 aaPredicted RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 BPIFA3Q9BQP9 254 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 ENC1O14682 589 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 PCP11498 1178 aaKnown RBP10.25□□□□□ -0.77
CALD1-220ENST00000482470 SLC1A4P43007 532 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 ADCY7P51828 1080 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 CENPHQ9H3R5 247 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
CALD1-220ENST00000482470 B4DLN1 442 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 TUBB4AP04350 444 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 KIF5AQ12840 1032 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 KRT31Q15323 416 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 LRRC41Q15345 812 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 CYP26C1Q6V0L0 522 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 PHF20Q9BVI0 1012 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 HPSEQ9Y251 543 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 FGFR1OPO95684 399 aaKnown RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 LMAN1P49257 510 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 RASGRP2Q7LDG7 609 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 TMTC1Q8IUR5 882 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 DBNDD1Q9H9R9 158 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 NLRC4Q9NPP4 1024 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 LONP1P36776 959 aaKnown RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 MRPL12P52815 198 aaKnown RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 RNASE9P60153 205 aaKnown RBP10.24□□□□□ -0.77
CALD1-220ENST00000482470 FBXO33Q7Z6M2 555 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 ANKRD13CQ8N6S4 541 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 CRACR2AQ9BSW2 395 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 PLEKHA4Q9H4M7 779 aa10.24□□□□□ -0.77
CALD1-220ENST00000482470 USP17L5A8MUK1 530 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 KRT86O43790 486 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 PLCG1P19174 1290 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 ATP2B4P23634 1241 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 NOP2P46087 812 aaKnown RBP10.23□□□□□ -0.77
CALD1-220ENST00000482470 UBE2SQ16763 222 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
CALD1-220ENST00000482470 SECISBP2LQ93073 1101 aaKnown RBP10.23□□□□□ -0.77
CALD1-220ENST00000482470 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 CEP95Q96GE4 821 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
CALD1-220ENST00000482470 VEZTQ9HBM0 779 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 TACC3Q9Y6A5 838 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 JCADQ9P266 1359 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 CCDC66A2RUB6 948 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 PRCPP42785 496 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 SEC23AQ15436 765 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 KMT5BQ4FZB7 885 aa10.23□□□□□ -0.77
CALD1-220ENST00000482470 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
CALD1-220ENST00000482470 FBXL16Q8N461 479 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms