RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 TRIM43Q96BQ3 446 aaPredicted RBP22.73■■□□□ 1.23
TMEM139-208ENST00000482420 PHF24Q9UPV7 400 aa22.73■■□□□ 1.23
TMEM139-208ENST00000482420 CTDP1Q9Y5B0 961 aaPredicted RBP22.73■■□□□ 1.23
TMEM139-208ENST00000482420 SMCHD1A6NHR9 2005 aa22.73■■□□□ 1.23
TMEM139-208ENST00000482420 POTEB2H3BUK9 544 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 ZFYP08048 801 aaPredicted RBP22.72■■□□□ 1.23
TMEM139-208ENST00000482420 AKR1A1P14550 325 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 TLE2Q04725 743 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 ZNF444Q8N0Y2 327 aaPredicted RBP22.72■■□□□ 1.23
TMEM139-208ENST00000482420 LRRC47Q8N1G4 583 aaKnown RBP22.72■■□□□ 1.23
TMEM139-208ENST00000482420 PRPF38AQ8NAV1 312 aaKnown RBP22.72■■□□□ 1.23
TMEM139-208ENST00000482420 KIFC2Q96AC6 838 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 DDX11Q96FC9 970 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 CEP95Q96GE4 821 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 GUCD1Q96NT3 240 aa22.72■■□□□ 1.23
TMEM139-208ENST00000482420 MYH4Q9Y623 1939 aa22.71■■□□□ 1.23
TMEM139-208ENST00000482420 IGKV6D-41A0A0C4DH26 115 aa22.71■■□□□ 1.23
TMEM139-208ENST00000482420 A0A1W2PQ45 241 aaPredicted RBP22.71■■□□□ 1.23
TMEM139-208ENST00000482420 A0A1W2PQY0 241 aa22.71■■□□□ 1.23
TMEM139-208ENST00000482420 GNAT2P19087 354 aa22.71■■□□□ 1.23
TMEM139-208ENST00000482420 SEC62Q99442 399 aaKnown RBP22.71■■□□□ 1.23
TMEM139-208ENST00000482420 RAVER2Q9HCJ3 691 aaKnown RBP22.71■■□□□ 1.23
TMEM139-208ENST00000482420 ZHX1Q9UKY1 873 aaPredicted RBP22.71■■□□□ 1.23
TMEM139-208ENST00000482420 PQBP1O60828 265 aaKnown RBP22.7■■□□□ 1.22
TMEM139-208ENST00000482420 ZBED4O75132 1171 aa22.7■■□□□ 1.22
TMEM139-208ENST00000482420 ZNF697Q5TEC3 545 aa22.7■■□□□ 1.22
TMEM139-208ENST00000482420 C1orf53Q5VUE5 145 aa22.7■■□□□ 1.22
TMEM139-208ENST00000482420 ZNF287Q9HBT7 754 aa22.7■■□□□ 1.22
TMEM139-208ENST00000482420 ISY1Q9ULR0 285 aaKnown RBP22.7■■□□□ 1.22
TMEM139-208ENST00000482420 SYNRGQ9UMZ2 1314 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 CLTBP09497 229 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 ITGB8P26012 769 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 FAM109BQ6ICB4 259 aaPredicted RBP22.69■■□□□ 1.22
TMEM139-208ENST00000482420 IFNL3Q8IZI9 196 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 OTUD7AQ8TE49 926 aaPredicted RBP22.69■■□□□ 1.22
TMEM139-208ENST00000482420 CHMP4CQ96CF2 233 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 MTMR4Q9NYA4 1195 aa22.69■■□□□ 1.22
TMEM139-208ENST00000482420 PATL2C9JE40 543 aaKnown RBP22.68■■□□□ 1.22
TMEM139-208ENST00000482420 ADAMTS4O75173 837 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 SNAI1O95863 264 aaPredicted RBP22.68■■□□□ 1.22
TMEM139-208ENST00000482420 TTLL1O95922 423 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 TSPY3P0CV98 308 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 TSPY8P0CW00 308 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 FSD1Q9BTV5 496 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 HOMER2Q9NSB8 354 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 TACC3Q9Y6A5 838 aa22.68■■□□□ 1.22
TMEM139-208ENST00000482420 SYNGAP1Q96PV0 1343 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 DNAJC25-GNG10A0A024R161 153 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 LRRFIP1Q32MZ4 808 aaKnown RBP22.67■■□□□ 1.22
TMEM139-208ENST00000482420 ANKRD35Q8N283 1001 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 MSL3Q8N5Y2 521 aaKnown RBP22.67■■□□□ 1.22
TMEM139-208ENST00000482420 NACAP1Q9BZK3 213 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 SLC38A10Q9HBR0 1119 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 FEM1BQ9UK73 627 aa22.67■■□□□ 1.22
TMEM139-208ENST00000482420 A0A0C4DFX4 3053 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 TTC41PQ6P2S7 1318 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 ATP2A1O14983 1001 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 ACLYP53396 1101 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 SLFN13Q68D06 897 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 PI4K2BQ8TCG2 481 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 MKL1Q969V6 931 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 NAPBQ9H115 298 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 STARD7Q9NQZ5 370 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 FAM184BQ9ULE4 1060 aa22.66■■□□□ 1.22
TMEM139-208ENST00000482420 MYADML2A6NDP7 307 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 ERC2O15083 957 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 RAG1P15918 1043 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 PDE4BQ07343 736 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 MAMDC4Q6UXC1 1216 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 GMCL1P1Q8NEA9 526 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 TMEM39AQ9NV64 488 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 PCDHB15Q9Y5E8 787 aa22.65■■□□□ 1.22
TMEM139-208ENST00000482420 PLIN4Q96Q06 1357 aa22.64■■□□□ 1.22
TMEM139-208ENST00000482420 BMP3P12645 472 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 EPHB4P54760 987 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 IRX5P78411 483 aaPredicted RBP22.64■■□□□ 1.21
TMEM139-208ENST00000482420 TFAP4Q01664 338 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 PPARAQ07869 468 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 KCNA10Q16322 511 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 NEDD1Q8NHV4 660 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 NUP133Q8WUM0 1156 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.64■■□□□ 1.21
TMEM139-208ENST00000482420 UNC80Q8N2C7 3258 aa22.64■■□□□ 1.21
TMEM139-208ENST00000482420 TMEM232C9JQI7 657 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 ADCY6O43306 1168 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 SLC3A2P08195 630 aaKnown RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 C6orf222P0C671 652 aaPredicted RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 CCDC129Q6ZRS4 1044 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 ZNF467Q7Z7K2 595 aaPredicted RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 RNPC3Q96LT9 517 aaKnown RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 FGD4Q96M96 766 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 TSEN34Q9BSV6 310 aaKnown RBP22.63■■□□□ 1.21
TMEM139-208ENST00000482420 FBXO40Q9UH90 709 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 SYNPO2Q9UMS6 1093 aa22.63■■□□□ 1.21
TMEM139-208ENST00000482420 KIAA0355O15063 1070 aa22.62■■□□□ 1.21
TMEM139-208ENST00000482420 DUSP11O75319 330 aaKnown RBP22.62■■□□□ 1.21
TMEM139-208ENST00000482420 STAT2P52630 851 aa22.62■■□□□ 1.21
TMEM139-208ENST00000482420 FAAP100Q0VG06 881 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms