RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 ZBED4O75132 1171 aa16.56■□□□□ 0.24
CAPN8-209ENST00000482401 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
CAPN8-209ENST00000482401 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
CAPN8-209ENST00000482401 SNRNP48Q6IEG0 339 aaKnown RBP16.56■□□□□ 0.24
CAPN8-209ENST00000482401 ANKRD33Q7Z3H0 272 aa16.56■□□□□ 0.24
CAPN8-209ENST00000482401 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
CAPN8-209ENST00000482401 SPC25Q9HBM1 224 aa16.56■□□□□ 0.24
CAPN8-209ENST00000482401 SMCHD1A6NHR9 2005 aa16.56■□□□□ 0.24
CAPN8-209ENST00000482401 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
CAPN8-209ENST00000482401 MROH7Q68CQ1 1323 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 COL11A1P12107 1806 aaPredicted RBP16.55■□□□□ 0.24
CAPN8-209ENST00000482401 F5H6K3 240 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 ATP2A1O14983 1001 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 FPGSQ05932 587 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 KLRC3Q07444 240 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 CCDC174Q6PII3 467 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 ZNF467Q7Z7K2 595 aaPredicted RBP16.55■□□□□ 0.24
CAPN8-209ENST00000482401 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
CAPN8-209ENST00000482401 MAFAQ8NHW3 353 aaPredicted RBP16.55■□□□□ 0.24
CAPN8-209ENST00000482401 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
CAPN8-209ENST00000482401 STARD7Q9NQZ5 370 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 FBXO40Q9UH90 709 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 VCANP13611 3396 aa16.55■□□□□ 0.24
CAPN8-209ENST00000482401 PRUNE2Q8WUY3 3088 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 SMIM22K7EJ46 135 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 DUSP11O75319 330 aaKnown RBP16.54■□□□□ 0.24
CAPN8-209ENST00000482401 GNAT2P19087 354 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 RASA1P20936 1047 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 ACLYP53396 1101 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
CAPN8-209ENST00000482401 PCSK9Q8NBP7 692 aaKnown RBP16.54■□□□□ 0.24
CAPN8-209ENST00000482401 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 MYH7P12883 1935 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 PLXNA1Q9UIW2 1896 aa16.54■□□□□ 0.24
CAPN8-209ENST00000482401 ELP1O95163 1332 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 DNAJC25-GNG10A0A024R161 153 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 ADAMTS4O75173 837 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 NDUFB10O96000 172 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 CHGBP05060 677 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
CAPN8-209ENST00000482401 FDX1P10109 184 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 FOSL2P15408 326 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 KCNA10Q16322 511 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 KLHDC9Q8NEP7 349 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 MKL1Q969V6 931 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 GLT1D1Q96MS3 346 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
CAPN8-209ENST00000482401 FEM1BQ9UK73 627 aa16.53■□□□□ 0.24
CAPN8-209ENST00000482401 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
CAPN8-209ENST00000482401 CDH23Q9H251 3354 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.52■□□□□ 0.24
CAPN8-209ENST00000482401 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.52■□□□□ 0.24
CAPN8-209ENST00000482401 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.24
CAPN8-209ENST00000482401 TIMP1P01033 207 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 ITGB8P26012 769 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 OAZ1P54368 228 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 FAAP100Q0VG06 881 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 ACVR2BQ13705 512 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.52■□□□□ 0.24
CAPN8-209ENST00000482401 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 MYLIPQ8WY64 445 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 APPBP2Q92624 585 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 TTYH1Q9H313 450 aaPredicted RBP16.52■□□□□ 0.24
CAPN8-209ENST00000482401 ABHD16BQ9H3Z7 469 aa16.52■□□□□ 0.24
CAPN8-209ENST00000482401 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
CAPN8-209ENST00000482401 APPP05067 770 aa16.51■□□□□ 0.23
CAPN8-209ENST00000482401 CST5P28325 142 aaPredicted RBP16.51■□□□□ 0.23
CAPN8-209ENST00000482401 TDO2P48775 406 aa16.51■□□□□ 0.23
CAPN8-209ENST00000482401 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
CAPN8-209ENST00000482401 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
CAPN8-209ENST00000482401 RIPK3Q9Y572 518 aa16.51■□□□□ 0.23
CAPN8-209ENST00000482401 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 TTLL1O95922 423 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 PPIGQ13427 754 aaKnown RBP eCLIP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 GMCL1P1Q8NEA9 526 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 OSBP2Q969R2 916 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 LENG1Q96BZ8 264 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.5■□□□□ 0.23
CAPN8-209ENST00000482401 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
CAPN8-209ENST00000482401 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms