RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 HERVK_113P62684 666 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 RAB3GAP1Q15042 981 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
HLA-B-253ENST00000481849 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
HLA-B-253ENST00000481849 FEZ1Q99689 392 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 TXNRD2Q9NNW7 524 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
HLA-B-253ENST00000481849 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
HLA-B-253ENST00000481849 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 GOLIM4O00461 696 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 AVPP01185 164 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
HLA-B-253ENST00000481849 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
HLA-B-253ENST00000481849 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 CCAR1Q8IX12 1150 aaKnown RBP10.91□□□□□ -0.66
HLA-B-253ENST00000481849 CRIPAKQ8N1N5 446 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 GPRC5AQ8NFJ5 357 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
HLA-B-253ENST00000481849 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.91□□□□□ -0.66
HLA-B-253ENST00000481849 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
HLA-B-253ENST00000481849 IGSF3O75054 1194 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 HMGCRP04035 888 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 POLR3DP05423 398 aaPredicted RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 PDE6AP16499 860 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 PLCD1P51178 756 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 GUCA2AQ02747 115 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 CTC1Q2NKJ3 1217 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 SLC9C2Q5TAH2 1124 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 TTC6Q86TZ1 520 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 DIS3LQ8TF46 1054 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 EDC3Q96F86 508 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 PAWRQ96IZ0 340 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 CWC22Q9HCG8 908 aaKnown RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
HLA-B-253ENST00000481849 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 HCN4Q9Y3Q4 1203 aa10.9□□□□□ -0.66
HLA-B-253ENST00000481849 MAST2Q6P0Q8 1798 aa10.9□□□□□ -0.67
HLA-B-253ENST00000481849 ZNF532Q9HCE3 1301 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 CFAP54Q96N23 3096 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
HLA-B-253ENST00000481849 HMMRO75330 724 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 MS4A1P11836 297 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 TTF1Q15361 905 aaPredicted RBP10.89□□□□□ -0.67
HLA-B-253ENST00000481849 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 WDR78Q5VTH9 848 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 TATDN1Q6P1N9 297 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 SIRT2Q8IXJ6 389 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 ACER1Q8TDN7 264 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 TRIB2Q92519 343 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 PORCNQ9H237 461 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 CABP5Q9NP86 173 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 NR2E3Q9Y5X4 410 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 TRANK1O15050 2925 aa10.89□□□□□ -0.67
HLA-B-253ENST00000481849 PHIPQ8WWQ0 1821 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 CYP2D6P10635 497 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 SHMT1P34896 483 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 ERVK-24P63145 666 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 PDE3AQ14432 1141 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
HLA-B-253ENST00000481849 LCORLQ8N3X6 602 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 SDR42E1Q8WUS8 393 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 CRNKL1Q9BZJ0 848 aaKnown RBP10.88□□□□□ -0.67
HLA-B-253ENST00000481849 EHD4Q9H223 541 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 BOLA2Q9H3K6 86 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 ARMT1Q9H993 441 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
HLA-B-253ENST00000481849 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 MCM9Q9NXL9 1143 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 DACH1Q9UI36 760 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 DDX19BQ9UMR2 479 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
HLA-B-253ENST00000481849 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 ZFHX4Q86UP3 3567 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms