RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CDC27P30260 824 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 DSG3P32926 999 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 IRX3P78415 501 aaPredicted RBP24.11■■□□□ 1.45
VPS16-207ENST00000481812 TTBK2Q6IQ55 1244 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 GTF3C2Q8WUA4 911 aaPredicted RBP24.11■■□□□ 1.45
VPS16-207ENST00000481812 SPZ1Q9BXG8 430 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 PPP1R9AQ9ULJ8 1098 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 ADAMTS5Q9UNA0 930 aa24.11■■□□□ 1.45
VPS16-207ENST00000481812 DHX16O60231 1041 aaKnown RBP24.1■■□□□ 1.45
VPS16-207ENST00000481812 TMTC3Q6ZXV5 915 aa24.1■■□□□ 1.45
VPS16-207ENST00000481812 NOL8Q76FK4 1167 aaKnown RBP24.1■■□□□ 1.45
VPS16-207ENST00000481812 RAB11FIP4Q86YS3 637 aa24.1■■□□□ 1.45
VPS16-207ENST00000481812 CCDC144CPQ8IYA2 1237 aa24.1■■□□□ 1.45
VPS16-207ENST00000481812 RIOX1Q9H6W3 641 aa24.1■■□□□ 1.45
VPS16-207ENST00000481812 LARGE1O95461 756 aa24.09■■□□□ 1.45
VPS16-207ENST00000481812 ADD1P35611 737 aaKnown RBP24.09■■□□□ 1.45
VPS16-207ENST00000481812 CCT2P78371 535 aaKnown RBP24.09■■□□□ 1.45
VPS16-207ENST00000481812 SYDE2Q5VT97 1194 aa24.09■■□□□ 1.45
VPS16-207ENST00000481812 DNAJC5GQ8N7S2 189 aa24.09■■□□□ 1.45
VPS16-207ENST00000481812 GTF3C6Q969F1 213 aa24.09■■□□□ 1.45
VPS16-207ENST00000481812 PARK7Q99497 189 aaKnown RBP24.09■■□□□ 1.45
VPS16-207ENST00000481812 FBXO28Q9NVF7 368 aa24.09■■□□□ 1.45
VPS16-207ENST00000481812 ISY1Q9ULR0 285 aaKnown RBP24.09■■□□□ 1.45
VPS16-207ENST00000481812 BAZ2BQ9UIF8 2168 aaKnown RBP24.09■■□□□ 1.45
VPS16-207ENST00000481812 A0A0G2JMZ2 1700 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 SPDYE16A6NNV3 312 aaPredicted RBP24.08■■□□□ 1.45
VPS16-207ENST00000481812 SCRN1Q12765 414 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 IKQ13123 557 aaPredicted RBP24.08■■□□□ 1.45
VPS16-207ENST00000481812 STK3Q13188 491 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 NTRK3Q16288 839 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 CPLX2Q6PUV4 134 aaKnown RBP24.08■■□□□ 1.45
VPS16-207ENST00000481812 SRBD1Q8N5C6 995 aaKnown RBP24.08■■□□□ 1.45
VPS16-207ENST00000481812 MB21D1Q8N884 522 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 MTMR8Q96EF0 704 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 TMX3Q96JJ7 454 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 P2RX7Q99572 595 aaKnown RBP24.08■■□□□ 1.45
VPS16-207ENST00000481812 UBA5Q9GZZ9 404 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 PRR12Q9ULL5 1215 aa24.08■■□□□ 1.45
VPS16-207ENST00000481812 PLEKHA8P1O95397 391 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 IFNAR1P17181 557 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 SLC16A2P36021 539 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 HERVK_113P62684 666 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 FUT2Q10981 343 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 ADGRF4Q8IZF3 695 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 CFHR5Q9BXR6 569 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 NCOA5Q9HCD5 579 aaKnown RBP24.07■■□□□ 1.44
VPS16-207ENST00000481812 MYH6P13533 1939 aa24.07■■□□□ 1.44
VPS16-207ENST00000481812 COL11A1P12107 1806 aaPredicted RBP24.06■■□□□ 1.44
VPS16-207ENST00000481812 CPLX1O14810 134 aa24.06■■□□□ 1.44
VPS16-207ENST00000481812 CA12O43570 354 aa24.06■■□□□ 1.44
VPS16-207ENST00000481812 CYTH3O43739 400 aa24.06■■□□□ 1.44
VPS16-207ENST00000481812 GCLCP48506 637 aaPredicted RBP24.06■■□□□ 1.44
VPS16-207ENST00000481812 TAF1CQ15572 869 aaPredicted RBP24.06■■□□□ 1.44
VPS16-207ENST00000481812 NBPF11Q86T75 865 aa24.06■■□□□ 1.44
VPS16-207ENST00000481812 KIFC2Q96AC6 838 aa24.06■■□□□ 1.44
VPS16-207ENST00000481812 K7ELQ4 463 aaPredicted RBP24.05■■□□□ 1.44
VPS16-207ENST00000481812 VWA5AO00534 786 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 CDKL5O76039 1030 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 SLC35G1Q2M3R5 365 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 ATG4CQ96DT6 458 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 RANBP17Q9H2T7 1088 aaKnown RBP24.05■■□□□ 1.44
VPS16-207ENST00000481812 JMJD4Q9H9V9 463 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 SLC38A10Q9HBR0 1119 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 ZFYVE28Q9HCC9 887 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 RBM27Q9P2N5 1060 aaKnown RBP24.05■■□□□ 1.44
VPS16-207ENST00000481812 PNMA2Q9UL42 364 aa24.05■■□□□ 1.44
VPS16-207ENST00000481812 ATP2A1O14983 1001 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 ZBED4O75132 1171 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 CYP2C8P10632 490 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 OAZ1P54368 228 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 HSCBQ8IWL3 235 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 LLPHQ9BRT6 129 aaKnown RBP24.04■■□□□ 1.44
VPS16-207ENST00000481812 RNF26Q9BY78 433 aaPredicted RBP24.04■■□□□ 1.44
VPS16-207ENST00000481812 CPVLQ9H3G5 476 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 RABGAP1Q9Y3P9 1069 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 CNTNAP5Q8WYK1 1306 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 ADGRA2Q96PE1 1338 aa24.04■■□□□ 1.44
VPS16-207ENST00000481812 MAP2K1Q02750 393 aaPredicted RBP24.03■■□□□ 1.44
VPS16-207ENST00000481812 ST3GAL1Q11201 340 aa24.03■■□□□ 1.44
VPS16-207ENST00000481812 CUL4AQ13619 759 aa24.03■■□□□ 1.44
VPS16-207ENST00000481812 REPS2Q8NFH8 660 aa24.03■■□□□ 1.44
VPS16-207ENST00000481812 SMCR8Q8TEV9 937 aaPredicted RBP24.03■■□□□ 1.44
VPS16-207ENST00000481812 PRPF3O43395 683 aaKnown RBP24.02■■□□□ 1.44
VPS16-207ENST00000481812 TLR2O60603 784 aa24.02■■□□□ 1.44
VPS16-207ENST00000481812 CMTR1Q8N1G2 835 aaKnown RBP24.02■■□□□ 1.44
VPS16-207ENST00000481812 RRP36Q96EU6 259 aaKnown RBP24.02■■□□□ 1.44
VPS16-207ENST00000481812 RBPJLQ9UBG7 517 aa24.02■■□□□ 1.44
VPS16-207ENST00000481812 MORF4L1Q9UBU8 362 aa24.02■■□□□ 1.44
VPS16-207ENST00000481812 PNMA6FA0A0J9YX94 578 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 ZBTB5O15062 677 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 TRAF1Q13077 416 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 POTEEQ6S8J3 1075 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 CCDC83Q8IWF9 413 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 VAT1LQ9HCJ6 419 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 RNF186Q9NXI6 227 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 SAGE1Q9NXZ1 904 aa24.01■■□□□ 1.43
VPS16-207ENST00000481812 CTDP1Q9Y5B0 961 aaPredicted RBP24.01■■□□□ 1.43
VPS16-207ENST00000481812 FMNL1O95466 1100 aaPredicted RBP24■■□□□ 1.43
VPS16-207ENST00000481812 CTDNEP1O95476 244 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms