RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CST5P28325 142 aaPredicted RBP20.93■□□□□ 0.94
RXRB-203ENST00000481441 C12orf60Q5U649 245 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 MAMDC4Q6UXC1 1216 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 ITPRIPQ8IWB1 547 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.93■□□□□ 0.94
RXRB-203ENST00000481441 ASB2Q96Q27 587 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 KANSL2Q9H9L4 492 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 IL1RAPL2Q9NP60 686 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 ATP8A2Q9NTI2 1148 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 RAPGEFL1Q9UHV5 662 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 MCM3APO60318 1980 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 MROH7Q68CQ1 1323 aa20.93■□□□□ 0.94
RXRB-203ENST00000481441 DUSP11O75319 330 aaKnown RBP20.92■□□□□ 0.94
RXRB-203ENST00000481441 RLBP1P12271 317 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 CSF2RAP15509 400 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 IRX5P78411 483 aaPredicted RBP20.92■□□□□ 0.94
RXRB-203ENST00000481441 FAM83BQ5T0W9 1011 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 CCDC174Q6PII3 467 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 CCDC129Q6ZRS4 1044 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 C16orf86Q6ZW13 317 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 GLT1D1Q96MS3 346 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 THEGQ9P2T0 379 aa20.92■□□□□ 0.94
RXRB-203ENST00000481441 GBF1Q92538 1859 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 GREB1LQ9C091 1923 aaPredicted RBP20.91■□□□□ 0.94
RXRB-203ENST00000481441 DNAJC25-GNG10A0A024R161 153 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 ADGRE1Q14246 886 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 RHPN1Q8TCX5 695 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 DNAJC2Q99543 621 aaKnown RBP20.91■□□□□ 0.94
RXRB-203ENST00000481441 TEX13BQ9BXU2 312 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 GOPCQ9HD26 462 aa20.91■□□□□ 0.94
RXRB-203ENST00000481441 ZHX1Q9UKY1 873 aaPredicted RBP20.91■□□□□ 0.94
RXRB-203ENST00000481441 USP17L12C9JPN9 530 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 USP17L21D6R901 530 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 ADCY6O43306 1168 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 MBD4O95243 580 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 ASGR1P07306 291 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 SLFNL1Q499Z3 407 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 ZNF365Q70YC5 407 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 FTSJ3Q8IY81 847 aaKnown RBP20.9■□□□□ 0.94
RXRB-203ENST00000481441 TMEM199Q8N511 208 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 ADAMTS19Q8TE59 1207 aa20.9■□□□□ 0.94
RXRB-203ENST00000481441 C6orf222P0C671 652 aaPredicted RBP20.89■□□□□ 0.93
RXRB-203ENST00000481441 ACRP10323 421 aa20.89■□□□□ 0.93
RXRB-203ENST00000481441 ADD2P35612 726 aa20.89■□□□□ 0.93
RXRB-203ENST00000481441 PSRC1Q6PGN9 363 aaPredicted RBP20.89■□□□□ 0.93
RXRB-203ENST00000481441 PCSK9Q8NBP7 692 aaKnown RBP20.89■□□□□ 0.93
RXRB-203ENST00000481441 DDX11Q96FC9 970 aa20.89■□□□□ 0.93
RXRB-203ENST00000481441 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.89■□□□□ 0.93
RXRB-203ENST00000481441 UPF3AQ9H1J1 476 aaKnown RBP20.89■□□□□ 0.93
RXRB-203ENST00000481441 RIPK3Q9Y572 518 aa20.89■□□□□ 0.93
RXRB-203ENST00000481441 A0A0U1RQG5 324 aaPredicted RBP20.88■□□□□ 0.93
RXRB-203ENST00000481441 ARVCFO00192 962 aa20.88■□□□□ 0.93
RXRB-203ENST00000481441 MRPS5P82675 430 aaKnown RBP20.88■□□□□ 0.93
RXRB-203ENST00000481441 ACVR2BQ13705 512 aa20.88■□□□□ 0.93
RXRB-203ENST00000481441 SNRNP48Q6IEG0 339 aaKnown RBP20.88■□□□□ 0.93
RXRB-203ENST00000481441 ZNF467Q7Z7K2 595 aaPredicted RBP20.88■□□□□ 0.93
RXRB-203ENST00000481441 FAM126BQ8IXS8 530 aa20.88■□□□□ 0.93
RXRB-203ENST00000481441 SLF1Q9BQI6 1058 aa20.88■□□□□ 0.93
RXRB-203ENST00000481441 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
RXRB-203ENST00000481441 BDP1A6H8Y1 2624 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 MYH7P12883 1935 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 CHD9Q3L8U1 2897 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 RAD21O60216 631 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 GJA9P57773 515 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 HSP90AB4PQ58FF6 505 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 NUP88Q99567 741 aaPredicted RBP20.87■□□□□ 0.93
RXRB-203ENST00000481441 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.87■□□□□ 0.93
RXRB-203ENST00000481441 ZBED9Q6R2W3 1325 aa20.87■□□□□ 0.93
RXRB-203ENST00000481441 RAB30Q15771 203 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 CCDC85BQ15834 202 aaPredicted RBP20.86■□□□□ 0.93
RXRB-203ENST00000481441 AMOTL1Q8IY63 956 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
RXRB-203ENST00000481441 HERVK_113Q902F9 699 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 VTI1AQ96AJ9 217 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 FGD4Q96M96 766 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 UHRF1Q96T88 793 aaPredicted RBP20.86■□□□□ 0.93
RXRB-203ENST00000481441 ABHD16BQ9H3Z7 469 aa20.86■□□□□ 0.93
RXRB-203ENST00000481441 CXXC1Q9P0U4 656 aaPredicted RBP20.86■□□□□ 0.93
RXRB-203ENST00000481441 ATP2A1O14983 1001 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 CTAGE5O15320 804 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 CD4P01730 458 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 CCDC144BQ3MJ40 725 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 GNASQ5JWF2 1037 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.85■□□□□ 0.93
RXRB-203ENST00000481441 SPC25Q9HBM1 224 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 PAG1Q9NWQ8 432 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 MSRAQ9UJ68 235 aa20.85■□□□□ 0.93
RXRB-203ENST00000481441 TLR3O15455 904 aaKnown RBP20.84■□□□□ 0.93
RXRB-203ENST00000481441 CHGBP05060 677 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 IGFBP4P22692 258 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 CYP2C18P33260 490 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 NKX3-2P78367 333 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 CTR9Q6PD62 1173 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 PRPF38AQ8NAV1 312 aaKnown RBP20.84■□□□□ 0.93
RXRB-203ENST00000481441 NKX2-4Q9H2Z4 354 aa20.84■□□□□ 0.93
RXRB-203ENST00000481441 TCF20Q9UGU0 1960 aaKnown RBP20.84■□□□□ 0.93
RXRB-203ENST00000481441 APBB1O00213 710 aa20.83■□□□□ 0.93
RXRB-203ENST00000481441 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
RXRB-203ENST00000481441 PLA2G5P39877 138 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms