RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 TSPY10P0CW01 314 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 CWF19L2Q2TBE0 894 aaKnown RBP9.74□□□□□ -0.85
CBX3-206ENST00000481057 WNT10AQ9GZT5 417 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 ACBD3Q9H3P7 528 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 STOML1Q9UBI4 398 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 DAGLAQ9Y4D2 1042 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 SPATA31A1Q5TZJ5 1347 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 DYRK3O43781 588 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 LBX1P52954 281 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 PAK2Q13177 524 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 MAP7Q14244 749 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 UBE3DQ7Z6J8 389 aa9.73□□□□□ -0.85
CBX3-206ENST00000481057 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
CBX3-206ENST00000481057 HMX2A2RU54 273 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 GRK4P32298 578 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 PAOXQ6QHF9 649 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 PMFBP1Q8TBY8 1022 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 PCOLCE2Q9UKZ9 415 aa9.72□□□□□ -0.85
CBX3-206ENST00000481057 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.86
CBX3-206ENST00000481057 FURINP09958 794 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 ETF1P62495 437 aaKnown RBP9.71□□□□□ -0.86
CBX3-206ENST00000481057 TXNRD1Q16881 649 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 SEZ6Q53EL9 994 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 SEZ6L2Q6UXD5 910 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 PTF1AQ7RTS3 328 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 ZNF507Q8TCN5 953 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 NKD1Q969G9 470 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 METP08581 1390 aa9.71□□□□□ -0.86
CBX3-206ENST00000481057 RRBP1Q9P2E9 1410 aaKnown RBP9.71□□□□□ -0.86
CBX3-206ENST00000481057 GJA8P48165 433 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 PDE4BQ07343 736 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 SLITRK4Q8IW52 837 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.7□□□□□ -0.86
CBX3-206ENST00000481057 KCT2Q8NC54 265 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 BRMS1Q9HCU9 246 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
CBX3-206ENST00000481057 PRKAG2Q9UGJ0 569 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 CORINQ9Y5Q5 1042 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 PRR36Q9H6K5 1346 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
CBX3-206ENST00000481057 PGRP06401 933 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 TNNI2P48788 182 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 CDC37L1Q7L3B6 337 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 GPRASP2Q96D09 838 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 C1GALT1Q9NS00 363 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 USP35Q9P2H5 1018 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 ADAM30Q9UKF2 790 aa9.69□□□□□ -0.86
CBX3-206ENST00000481057 FSTP19883 344 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 RNF43Q68DV7 783 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 HID1Q8IV36 788 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 RASGRP4Q8TDF6 673 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 INPP5FQ9Y2H2 1132 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
CBX3-206ENST00000481057 TNS3Q68CZ2 1445 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 HTR3BO95264 441 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 PLCG1P19174 1290 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 CAP2P40123 477 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 NKG7Q16617 165 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 SMC1BQ8NDV3 1235 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 GATA6Q92908 595 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 TJP2Q9UDY2 1190 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 CUL9Q8IWT3 2517 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 COL14A1Q05707 1796 aaKnown RBP9.67□□□□□ -0.86
CBX3-206ENST00000481057 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
CBX3-206ENST00000481057 TECPR2O15040 1411 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 GSC2O15499 205 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 NFIAQ12857 509 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 CDK5R2Q13319 367 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 SLBPQ14493 270 aaKnown RBP eCLIP9.66□□□□□ -0.86
CBX3-206ENST00000481057 TMEM201Q5SNT2 666 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 REXO1Q8N1G1 1221 aaKnown RBP9.66□□□□□ -0.86
CBX3-206ENST00000481057 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
CBX3-206ENST00000481057 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 DBNDD2Q9BQY9 259 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 TINF2Q9BSI4 451 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 REV1Q9UBZ9 1251 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 PCDHB14Q9Y5E9 798 aa9.66□□□□□ -0.86
CBX3-206ENST00000481057 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 KANK1Q14678 1352 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 ATE1O95260 518 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 ADMP35318 185 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 ZNF165P49910 485 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 CLCQ05315 142 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 ARMCX6Q7L4S7 300 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 ZAR1Q86SH2 424 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 MRPL41Q8IXM3 137 aaKnown RBP9.65□□□□□ -0.86
CBX3-206ENST00000481057 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 EHMT1Q9H9B1 1298 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 CAPN10Q9HC96 672 aa9.65□□□□□ -0.86
CBX3-206ENST00000481057 LRIG2O94898 1065 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms