RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TEX13BQ9BXU2 312 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 RNF41Q9H4P4 317 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-209ENST00000480900 TCP11L1Q9NUJ3 509 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 SMCHD1A6NHR9 2005 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 RAD50Q92878 1312 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 ATP2A1O14983 1001 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 SLC1A4P43007 532 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 NT5C2P49902 561 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 OLFML2BQ68BL8 750 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 ANKLE1Q8NAG6 615 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 KIFC2Q96AC6 838 aa20.09■□□□□ 0.81
HSPG2-209ENST00000480900 ZNF213O14771 459 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 COBLO75128 1261 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 ZBED4O75132 1171 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 FDX1P10109 184 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 STAT2P52630 851 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 FAM160B2Q86V87 743 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 CHURC1Q8WUH1 139 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 HTATIP2Q9BUP3 242 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 CTNNA3Q9UI47 895 aa20.08■□□□□ 0.81
HSPG2-209ENST00000480900 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.81
HSPG2-209ENST00000480900 MCM3APO60318 1980 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 TMEM232C9JQI7 657 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 PLA2G6O60733 806 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 MCCP23508 829 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-209ENST00000480900 OAZ1P54368 228 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 SNRNP48Q6IEG0 339 aaKnown RBP20.07■□□□□ 0.8
HSPG2-209ENST00000480900 MMP19Q99542 508 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 OGDHLQ9ULD0 1010 aa20.07■□□□□ 0.8
HSPG2-209ENST00000480900 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
HSPG2-209ENST00000480900 NEDD4P46934 1319 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 TOP1P11387 765 aaKnown RBP20.06■□□□□ 0.8
HSPG2-209ENST00000480900 KCTD2Q14681 263 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 RCSD1Q6JBY9 416 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 ESR2Q92731 530 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 IL25Q9H293 177 aa20.06■□□□□ 0.8
HSPG2-209ENST00000480900 CYBAP13498 195 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 CHMLP26374 656 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 CYP2C19P33261 490 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 IMMTQ16891 758 aaKnown RBP20.05■□□□□ 0.8
HSPG2-209ENST00000480900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.05■□□□□ 0.8
HSPG2-209ENST00000480900 CPXCR1Q8N123 301 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 DCAF4Q8WV16 495 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 MAML3Q96JK9 1138 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 TTC14Q96N46 770 aa20.05■□□□□ 0.8
HSPG2-209ENST00000480900 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
HSPG2-209ENST00000480900 DIS3Q9Y2L1 958 aaKnown RBP20.05■□□□□ 0.8
HSPG2-209ENST00000480900 MSCO60682 206 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 IKQ13123 557 aaPredicted RBP20.04■□□□□ 0.8
HSPG2-209ENST00000480900 LHX8Q68G74 356 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 KCTD1Q719H9 257 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 NECAB2Q7Z6G3 386 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 PAWRQ96IZ0 340 aaKnown RBP20.04■□□□□ 0.8
HSPG2-209ENST00000480900 TMEM47Q9BQJ4 181 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 RIPK3Q9Y572 518 aa20.04■□□□□ 0.8
HSPG2-209ENST00000480900 PGK2P07205 417 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 MNX1P50219 401 aaPredicted RBP20.03■□□□□ 0.8
HSPG2-209ENST00000480900 CCDC96Q2M329 555 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 ZNF792Q3KQV3 632 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 RASGRP2Q7LDG7 609 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 TRPV1Q8NER1 839 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 CHST13Q8NET6 341 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 DIS3LQ8TF46 1054 aaKnown RBP20.03■□□□□ 0.8
HSPG2-209ENST00000480900 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
HSPG2-209ENST00000480900 MYH6P13533 1939 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 CCDC178Q5BJE1 867 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 CENPQQ7L2Z9 268 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-209ENST00000480900 DPF3Q92784 378 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 CHMP4CQ96CF2 233 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 DDX20Q9UHI6 824 aaKnown RBP20.02■□□□□ 0.8
HSPG2-209ENST00000480900 NRBP1Q9UHY1 535 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 MTMR7Q9Y216 660 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 TRIOBPQ9H2D6 2365 aa20.02■□□□□ 0.8
HSPG2-209ENST00000480900 KDM4AO75164 1064 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 CNGA1P29973 690 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 IQCA1Q86XH1 822 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 DGKHQ86XP1 1220 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 KRT23Q9C075 422 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 CNNM2Q9H8M5 875 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 PRR12Q9ULL5 1215 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 ZNF536O15090 1300 aa20.01■□□□□ 0.79
HSPG2-209ENST00000480900 DNAJC25-GNG10A0A024R161 153 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 B4E1Z4 1266 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 PDHBP11177 359 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 SLC4A3P48751 1232 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 TKFCQ3LXA3 575 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 BTNL9Q6UXG8 535 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 DDX11Q96FC9 970 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 TINF2Q9BSI4 451 aa20■□□□□ 0.79
HSPG2-209ENST00000480900 SGSM2O43147 1006 aa19.99■□□□□ 0.79
HSPG2-209ENST00000480900 SEPT4O43236 478 aa19.99■□□□□ 0.79
HSPG2-209ENST00000480900 MSL3Q8N5Y2 521 aaKnown RBP19.99■□□□□ 0.79
HSPG2-209ENST00000480900 ZKSCAN3Q9BRR0 538 aa19.99■□□□□ 0.79
HSPG2-209ENST00000480900 C11orf49Q9H6J7 331 aa19.99■□□□□ 0.79
HSPG2-209ENST00000480900 ACAD9Q9H845 621 aa19.99■□□□□ 0.79
HSPG2-209ENST00000480900 NR2E3Q9Y5X4 410 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms