RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 TINF2Q9BSI4 451 aa20.21■□□□□ 0.83
LSG1-208ENST00000480853 ZNF865P0CJ78 1059 aaPredicted RBP20.2■□□□□ 0.82
LSG1-208ENST00000480853 TDHQ8IZJ6 230 aa20.2■□□□□ 0.82
LSG1-208ENST00000480853 PRPF38AQ8NAV1 312 aaKnown RBP20.2■□□□□ 0.82
LSG1-208ENST00000480853 NAPBQ9H115 298 aa20.2■□□□□ 0.82
LSG1-208ENST00000480853 ATP11BQ9Y2G3 1177 aa20.2■□□□□ 0.82
LSG1-208ENST00000480853 PGK1P00558 417 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 TSPY3P0CV98 308 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 TSPY8P0CW00 308 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 SLFN13Q68D06 897 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 Q7L0L9 218 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 NACAP1Q9BZK3 213 aa20.19■□□□□ 0.82
LSG1-208ENST00000480853 NMT2O60551 498 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 ZBED4O75132 1171 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 SNAI1O95863 264 aaPredicted RBP20.18■□□□□ 0.82
LSG1-208ENST00000480853 TTLL1O95922 423 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 PDE1AP54750 535 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
LSG1-208ENST00000480853 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
LSG1-208ENST00000480853 TEX13BQ9BXU2 312 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 IL17RBQ9NRM6 502 aa20.18■□□□□ 0.82
LSG1-208ENST00000480853 DIS3Q9Y2L1 958 aaKnown RBP20.18■□□□□ 0.82
LSG1-208ENST00000480853 MCM3APO60318 1980 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 KBTBD13C9JR72 458 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 SNAP25P60880 206 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 IRX5P78411 483 aaPredicted RBP20.17■□□□□ 0.82
LSG1-208ENST00000480853 PDE4BQ07343 736 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 TRIM60Q495X7 471 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 RASGRP2Q7LDG7 609 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 SH3RF1Q7Z6J0 888 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 DDX11Q96FC9 970 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 SLC38A10Q9HBR0 1119 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
LSG1-208ENST00000480853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
LSG1-208ENST00000480853 DNAJC25-GNG10A0A024R161 153 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 BMP3P12645 472 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 MCCP23508 829 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 LRIT3Q3SXY7 679 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 FAM227BQ96M60 508 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 FGD4Q96M96 766 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 XPNPEP3Q9NQH7 507 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
LSG1-208ENST00000480853 ATP2A1O14983 1001 aa20.15■□□□□ 0.82
LSG1-208ENST00000480853 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
LSG1-208ENST00000480853 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
LSG1-208ENST00000480853 COL6A3P12111 3177 aa20.14■□□□□ 0.82
LSG1-208ENST00000480853 TRIM43BA6NCK2 446 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 RARBP10826 455 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 COPB2P35606 906 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 HDAC1Q13547 482 aaPredicted RBP20.14■□□□□ 0.81
LSG1-208ENST00000480853 KCTD1Q719H9 257 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 DEFB123Q8N688 67 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 TRIM43Q96BQ3 446 aaPredicted RBP20.14■□□□□ 0.81
LSG1-208ENST00000480853 EVI5LQ96CN4 794 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 AGBL1Q96MI9 1066 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 LBHD1Q9BQE6 289 aaPredicted RBP20.14■□□□□ 0.81
LSG1-208ENST00000480853 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
LSG1-208ENST00000480853 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 MTMR7Q9Y216 660 aa20.14■□□□□ 0.81
LSG1-208ENST00000480853 LAMA2P24043 3122 aaKnown RBP20.13■□□□□ 0.81
LSG1-208ENST00000480853 PLIN4Q96Q06 1357 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
LSG1-208ENST00000480853 CNTN2Q02246 1040 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 TLE2Q04725 743 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 SNX17Q15036 470 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 ZBTB47Q9UFB7 747 aaPredicted RBP20.13■□□□□ 0.81
LSG1-208ENST00000480853 PHF24Q9UPV7 400 aa20.13■□□□□ 0.81
LSG1-208ENST00000480853 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
LSG1-208ENST00000480853 ZNF536O15090 1300 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 MYADML2A6NDP7 307 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 ADCY6O43306 1168 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 RANBP6O60518 1105 aaKnown RBP20.12■□□□□ 0.81
LSG1-208ENST00000480853 FGAP02671 866 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 ITGB8P26012 769 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 MAMDC4Q6UXC1 1216 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 BADQ92934 168 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 ZHX1Q9UKY1 873 aaPredicted RBP20.12■□□□□ 0.81
LSG1-208ENST00000480853 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 CNPY2Q9Y2B0 182 aa20.12■□□□□ 0.81
LSG1-208ENST00000480853 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 ADAMTS4O75173 837 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 IGHDP01880 384 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 AKR1A1P14550 325 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 SLC1A4P43007 532 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 NMIQ13287 307 aaPredicted RBP20.11■□□□□ 0.81
LSG1-208ENST00000480853 ZNF589Q86UQ0 364 aaPredicted RBP20.11■□□□□ 0.81
LSG1-208ENST00000480853 STAG1Q8WVM7 1258 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 PDLIM7Q9NR12 457 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 HELLSQ9NRZ9 838 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.11■□□□□ 0.81
LSG1-208ENST00000480853 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 ANAPC4Q9UJX5 808 aa20.11■□□□□ 0.81
LSG1-208ENST00000480853 A0A1W2PQ45 241 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms