RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 HPS5Q9UPZ3 1129 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 CYP2C8P10632 490 aa13.02□□□□□ -0.33
CLDN11-205ENST00000480067 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 ME3Q16798 604 aa13.02□□□□□ -0.33
CLDN11-205ENST00000480067 DNAJC5GQ8N7S2 189 aa13.02□□□□□ -0.33
CLDN11-205ENST00000480067 PARK7Q99497 189 aaKnown RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 VAT1LQ9HCJ6 419 aa13.02□□□□□ -0.33
CLDN11-205ENST00000480067 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
CLDN11-205ENST00000480067 CTDP1Q9Y5B0 961 aaPredicted RBP13.02□□□□□ -0.33
CLDN11-205ENST00000480067 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CPLX1O14810 134 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 PFKFB2O60825 505 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 DSG3P32926 999 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 HERVK_113P62684 666 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 BTNL9Q6UXG8 535 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CMTR1Q8N1G2 835 aaKnown RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-205ENST00000480067 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
CLDN11-205ENST00000480067 MYPNQ86TC9 1320 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 ZBED4O75132 1171 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 SMARCA1P28370 1054 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 CDC27P30260 824 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
CLDN11-205ENST00000480067 SCRN1Q12765 414 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
CLDN11-205ENST00000480067 NECAB1Q8N987 351 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 BEGAINQ9BUH8 593 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
CLDN11-205ENST00000480067 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
CLDN11-205ENST00000480067 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
CLDN11-205ENST00000480067 VWA5AO00534 786 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 CA12O43570 354 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 LARGE1O95461 756 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 FDX1P10109 184 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
CLDN11-205ENST00000480067 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
CLDN11-205ENST00000480067 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 SNX21Q969T3 373 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 TMX3Q96JJ7 454 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 NID2Q14112 1375 aa12.99□□□□□ -0.33
CLDN11-205ENST00000480067 TRPA1O75762 1119 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 CDKL5O76039 1030 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 CRHR2Q13324 411 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 LBX2Q6XYB7 198 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 JMJD4Q9H9V9 463 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 RNF186Q9NXI6 227 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 ADAMTS5Q9UNA0 930 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 CYTH3O43739 400 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 TLR2O60603 784 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 SNAP25P60880 206 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 SEC63Q9UGP8 760 aaKnown RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
CLDN11-205ENST00000480067 PTPRFP10586 1907 aa12.98□□□□□ -0.33
CLDN11-205ENST00000480067 IFNAR1P17181 557 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 PLS1Q14651 629 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 NTRK3Q16288 839 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 TRIM22Q8IYM9 498 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 CPXCR1Q8N123 301 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 PHKBQ93100 1093 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 PIGSQ96S52 555 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
CLDN11-205ENST00000480067 RBPJLQ9UBG7 517 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 LOC285556D6RIA3 1793 aa12.97□□□□□ -0.33
CLDN11-205ENST00000480067 PNMA6FA0A0J9YX94 578 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 K7ELQ4 463 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms