RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SLC25A27O95847 323 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 CAPN2P17655 700 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 PDE4BQ07343 736 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 SLFN13Q68D06 897 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 NEDD1Q8NHV4 660 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 RILPL2Q969X0 211 aa20.68■□□□□ 0.9
ECHDC1-216ENST00000479525 TTLL1O95922 423 aa20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 MDM2Q00987 491 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 FERMT2Q96AC1 680 aa20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 HOMER2Q9NSB8 354 aa20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 LTBP2Q14767 1821 aa20.67■□□□□ 0.9
ECHDC1-216ENST00000479525 PLIN4Q96Q06 1357 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 HAND2P61296 217 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 KCTD2Q14681 263 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 ZNF792Q3KQV3 632 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 RRP12Q5JTH9 1297 aaKnown RBP20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 GDF15Q99988 308 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
ECHDC1-216ENST00000479525 TSPY2A6NKD2 308 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 TMEM232C9JQI7 657 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 RANBP6O60518 1105 aaKnown RBP20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 KCTD1Q719H9 257 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 ABRAQ8N0Z2 381 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 PRPF38AQ8NAV1 312 aaKnown RBP20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 ZNF287Q9HBT7 754 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 IL17RBQ9NRM6 502 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 SLC5A4Q9NY91 659 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
ECHDC1-216ENST00000479525 LCTP09848 1927 aa20.64■□□□□ 0.9
ECHDC1-216ENST00000479525 SEPT4O43236 478 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 BMP3P12645 472 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 MCCP23508 829 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 IKQ13123 557 aaPredicted RBP20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 MKL1Q969V6 931 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 TINF2Q9BSI4 451 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 TEX13BQ9BXU2 312 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 ATP11BQ9Y2G3 1177 aa20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 DDX49Q9Y6V7 483 aaKnown RBP20.64■□□□□ 0.89
ECHDC1-216ENST00000479525 MSCO60682 206 aa20.63■□□□□ 0.89
ECHDC1-216ENST00000479525 ZBED4O75132 1171 aa20.63■□□□□ 0.89
ECHDC1-216ENST00000479525 PGK1P00558 417 aa20.63■□□□□ 0.89
ECHDC1-216ENST00000479525 RTP1P59025 263 aa20.63■□□□□ 0.89
ECHDC1-216ENST00000479525 IRX5P78411 483 aaPredicted RBP20.63■□□□□ 0.89
ECHDC1-216ENST00000479525 DNM1LO00429 736 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 ADCYAP1R1P41586 468 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 LRRC41Q15345 812 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 CCDC174Q6PII3 467 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 GMCL1P1Q8NEA9 526 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 DDX11Q96FC9 970 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 SLC38A10Q9HBR0 1119 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 HELLSQ9NRZ9 838 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 FEM1BQ9UK73 627 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 LAMA4Q16363 1823 aa20.62■□□□□ 0.89
ECHDC1-216ENST00000479525 KBTBD13C9JR72 458 aa20.61■□□□□ 0.89
ECHDC1-216ENST00000479525 FGAP02671 866 aa20.61■□□□□ 0.89
ECHDC1-216ENST00000479525 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
ECHDC1-216ENST00000479525 AGBL1Q96MI9 1066 aa20.61■□□□□ 0.89
ECHDC1-216ENST00000479525 UBE2OQ9C0C9 1292 aaKnown RBP20.61■□□□□ 0.89
ECHDC1-216ENST00000479525 ZNF865P0CJ78 1059 aaPredicted RBP20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 SLC1A4P43007 532 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 CHD1LQ86WJ1 897 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 PLEKHM2Q8IWE5 1019 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 FGD4Q96M96 766 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 RWDD1Q9H446 243 aaPredicted RBP20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 ZHX1Q9UKY1 873 aaPredicted RBP20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 LRRC37A2A6NM11 1700 aa20.6■□□□□ 0.89
ECHDC1-216ENST00000479525 SNAI1O95863 264 aaPredicted RBP20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 TRIM60Q495X7 471 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 TTBK2Q6IQ55 1244 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 XPNPEP3Q9NQH7 507 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 PRDM5Q9NQX1 630 aaPredicted RBP20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 ADCY6O43306 1168 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 STAT2P52630 851 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 CNTN2Q02246 1040 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 ARRDC4Q8NCT1 418 aa20.59■□□□□ 0.89
ECHDC1-216ENST00000479525 ZNF536O15090 1300 aa20.58■□□□□ 0.89
ECHDC1-216ENST00000479525 FRMPD2Q68DX3 1309 aaPredicted RBP20.58■□□□□ 0.89
ECHDC1-216ENST00000479525 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
ECHDC1-216ENST00000479525 DNAJC25-GNG10A0A024R161 153 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 MYADML2A6NDP7 307 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 RARBP10826 455 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 ALAS1P13196 640 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 PTGS1P23219 599 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 COPB2P35606 906 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 SLC16A2P36021 539 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.88
ECHDC1-216ENST00000479525 ANAPC4Q9UJX5 808 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms